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Information for unigene UN17225
| FASTA Sequence |
| Unigene ID: UN17225 | Length: 800 |
SSR | | GGAGCGTCTTCAGTCGAACGGATAAGACGAAGAAGAAGAAGAAGAAACAAGTGTTAGCGCTCCACTTGGAGAGGCGAGAACAAAGT
TGAAAAAATGGCGACCATGTCTGCTCTTCAGAGCTCATTTACATCTCTTTCCATATCCTCCAACTCCTCCTTCCTCGGCCAGCGTC
TCCTTTCCCCGATTCCCCTCTCCGTCGCTTCTCCGGTCAAACTCGTTGGGAACCCATGTCTTGTCTTTGCAAAGCTAAAGCGTTGG
GAACGGAAGAAATGCAAACCAAACAGTCTTCCCATTCTTCACAAGATGCATGTCAAGTTCGGAGATACGGTCAAAGTTATCTCTGG
ACGCGACAAGGGTAAGATTGGAGAAGTCACTAAGATCTTTACCCACAACAGCACCGTTGTCATCAAAGATGTCAACCTCAAGACCA
AACACATGAAGAGCCGTGAAGAGGGTGAGCCTGGCCAAATTGTCAAGATCGAAGCACCGATCCACAGCTCAAATGTGATGCTGTAT
TCGAAAGAAAAGGAGGTGGTAAGCCGGGTGGGTCACAAGGTCCTTGAAGATGGGCAGAAGGTAAGATATCTGATCAAAACTGGGGA
ACTTATCGACACCATCGAGAAGTGGAAGCAACTTAAGGAGGCTAAGGATAAAGAAAATACTCAAGTTGCAGTTGCCTCTTCATCTT
AACGTCTCCACTTTTGATATATTTGTCTGATGAATGTATTAAGTTGCTTCCTTAAGTTATGCTTTAGAATGGTGTTTTATTCTAAA
GATACATTTTTTACAAATTTTTTTCT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002864348 50S ribosomal protein L24, chloroplast [Arabidopsis lyrata subsp. lyrata] | 938 | 3e-099 |
| NP_851190 50S ribosomal protein L24 [Arabidopsis thaliana] | 917 | 8e-097 |
| CAA70851 plastid ribosomal protein [Arabidopsis thaliana] | 913 | 2e-096 |
| XP_002522816 mitochondrial ribosomal protein L24, putative [Ricinus communis] | 713 | 3e-073 |
| ACJ86132 unknown [Medicago truncatula] | 688 | 3e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P92959 50S ribosomal protein L24, chloroplastic | 917 | 4e-098 |
| P11893 50S ribosomal protein L24, chloroplastic | 675 | 4e-070 |
| Q02764 50S ribosomal protein L24, chloroplastic | 644 | 2e-066 |
| P27683 50S ribosomal protein L24, chloroplastic | 632 | 4e-065 |
| B1XJS8 50S ribosomal protein L24 | 373 | 4e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S9Z7 Mitochondrial ribosomal protein L24, putative | 713 | 2e-073 |
| B7FMZ9 Putative uncharacterized protein | 688 | 2e-070 |
| C6T0A2 Putative uncharacterized protein | 688 | 2e-070 |
| A9PCT1 Predicted protein | 687 | 3e-070 |
| C6SZB2 Putative uncharacterized protein | 679 | 2e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G54600.1 50S ribosomal protein L24, chloroplast (CL24) | 918 | 3e-099 |
| AT5G54600.2 50S ribosomal protein L24, chloroplast (CL24) | 466 | 6e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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