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Information for unigene UN17228

FASTA Sequence
Unigene ID: UN17228Length: 983  SNP
TTTTTTTTAGACAAAACACGCCGCGTCTTTGTGTTTTTATCATCACCAAACAGATCTGATCGCCCTGAGTCGTCGTCTCTTCTCTC
TCGATACCAAAAAGAAAAAACAATGGCTGAGGCAGCAACAGCTTTGAGGAAGCCTGTGTTCACCAAGGTTAATGAGCTGAGACCAG
GAACCAATGGTCACTCTCTGAACGTGAAAGTTATCAGCACGAAGATGGTGATGCAGAGAGGTGGTGGAGGAGGTCGTCCCAGTGGT
CCTCCGGCTCGTCAGATGCGCATTGCTGAGTGTCTTGTTGGTGATGAGACTGGAATCATTATCTTTACTGCTAGAAACGATCAAGT
GGATTTGATGAAAGAAGGCAAGGTTGTGACTCTGCGCAACGCCAAGATCGACATGTACAAGGGATCTATGAGGCTTGCAGTTGATA
GATGGGGACGCGTTGAAGTCGCTGAGGAGGATGCCACAGACATCACCGTCAAGGAAGATAACAATCTTTCCCTCATCGAGTATGAG
CTCGTGAACGTTGAAGCTTGATTTAGTTCAGCCAACTGAAAGAAAGCAGAGTGACTGACAAGACTTATATTCTCTAGTTGTAGAAG
CAATAGCATCTCTCTCTAGTCTCTACTCTGCTTTGAGTTTTTGCTTATCAGAATTTGCAGGTGGGGAGTCTTTTATGTATTATCTG
GCTTGCCTCTGATCTACCCTTTCTCGTTTTAAATATCAGGTTGCTGGATCATTCTCTTGTTCTAGTTTTGGTTTCTCTTTGTGTTA
AGTCTTTGGATGCTATAGAAAAATAAACGTATAAAGACGATATATTTAACGACGAGAACAATAAGTTTTATTTTATTCCTTCCAAT
GAAAGTGCCTCGAGACGACAGTTCAAATTGTTTGTATAGTGACATGTATTAGTATTCGTCAAAAATGTTGGTGGAATATATTGACA
ATTGGGTTTTGACTAGTGACATTTAAGATTGGTTTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_849633 replication factor A1 [Arabidopsis thaliana]6231e-062
XP_002892583 predicted protein [Arabidopsis lyrata subsp. lyrata]6231e-062
NP_563874 replication factor A1 [Arabidopsis thaliana]6142e-061
AAZ32857 unknown [Medicago sativa]5262e-051
XP_002525380 conserved hypothetical protein [Ricinus communis]5173e-050

Swiss-Prot top hits (Blast detail)Scoree value
O49453 Uncharacterized protein At4g284404032e-038

TrEMBL top hits (Blast detail)Scoree value
Q9XIJ0 T10O24.246239e-063
Q93W05 At1g10590/F20B24_16141e-061
Q45NM5 Putative uncharacterized protein (Fragment)5262e-051
B9SHB1 Putative uncharacterized protein5172e-050
A5C3Z4 Putative uncharacterized protein5101e-049

Arabidopsis top hits (Blast detail)Scoree value
AT1G10590.1 DNA-binding protein-related6244e-065
AT1G10590.3 DNA-binding protein-related6244e-065
AT1G10590.2 DNA-binding protein-related6244e-065
AT1G23750.1 DNA-binding protein-related5043e-051
AT2G33845.1 DNA-binding protein-related4301e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
118  57%
 
84  29%
 
71  7%
 
91  7%

Unigene MembersMember information