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Information for unigene UN17280
| FASTA Sequence |
| Unigene ID: UN17280 | Length: 914 |
SSR | SNP | AGGGGACTCGACCTCGAAGCTAAATTAGAATCCTCTCAAGATCTCTCTCTCTCTCTCTCTCTCTCTCTGGCGATTGAGGTGTGTGG
TAGCGAGTGATCATCATCATCATCATGTTCGTGATTGATTGGTTCTATGGCGTTCTCGCTTCGCTAGGTTTATGGCAGAAAGAGGC
TAAGATCTTGTTCCTCGGGCTCGATAACGCCGGCAAAACCACCTTGCTTCACATGCTCAAAGACGAGAGGTTGGTGCAGCACCAGC
CGACGCAGCATCCAACGTCTGAAGAACTGAGCATTGGCAAAATCAAGTTCAAGGCTTTTGATTTGGGCGGTCATCAGATTGCTCGC
AGGGTCTGGAAGGATTACTACGCTAAGGTGGATGCTGTGGTCTACCTAGTGGATGCTTACGACAAGGAGCGATTTGCAGAATCGAA
AAAGGAACTGGACGCGCTTCTCTCAGACGAATCTCTAGCCACCGTTCCGTTCCTCATCCTAGGAAACAAGATAGACATACCATACG
CTGCATCAGAGGACGAGCTCCGTTACCATCTCGGCCTCTCCAACTTCACCACGGGAAAGGGTAAAGTGAATCTAGTGGACTCCAAC
GTAAGACCATTGGAGGTTTTCATGTGCAGCATCGTCAGGAAGATGGGTTATGGCGAAGGCTTCAAATGGCTCTCTCAGTACATCAA
GTAACTACTAAGCCGCCAAGACTCCAACAACCACATGGCCTTGTTATTGCTAAACCATAAGTTCCCAGCTTTGTCTCTCTTGTCTT
GCTTTTTTCATGTTTTGTAAGAAATGTCGTGAAACTTAGCTTCTCGTTGCTCTGGTTTGTTTCTTTGTAGTGATTTTTTTTTTAAA
TAACATTACATGTTTCGTAATTTATACTATTAAATAAGGTAAAAATGTTTGGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| O04266 RecName: Full=GTP-binding protein SAR1A | 993 | 2e-105 |
| XP_002889409 Os01g0254000 [Arabidopsis lyrata subsp. lyrata] | 993 | 2e-105 |
| XP_002874941 Os01g0254000 [Arabidopsis lyrata subsp. lyrata] | 992 | 2e-105 |
| NP_192117 GTP-binding protein SAR1A [Arabidopsis thaliana] | 991 | 3e-105 |
| XP_002276743 PREDICTED: hypothetical protein [Vitis vinifera] | 981 | 4e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04266 GTP-binding protein SAR1A | 993 | 7e-107 |
| O04834 GTP-binding protein SAR1A | 991 | 1e-106 |
| Q01474 GTP-binding protein SAR1B | 964 | 2e-103 |
| O04267 GTP-binding protein SAR1B | 939 | 1e-100 |
| P52884 GTP-binding protein SAR2 | 911 | 2e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RZN0 GTP-binding protein sar1, putative | 979 | 4e-104 |
| B7FMA7 Putative uncharacterized protein | 977 | 7e-104 |
| B9HWX5 Predicted protein | 974 | 2e-103 |
| B9RNF8 GTP-binding protein sar1, putative | 973 | 2e-103 |
| A9PD96 Gtp-binding protein SAR1 | 971 | 4e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02080.1 ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2); GTP binding | 992 | 8e-108 |
| AT1G56330.1 ATSAR1B (SECRETION-ASSOCIATED RAS 1 B); GTP binding | 965 | 1e-104 |
| AT3G62560.1 GTP-binding protein, putative | 963 | 2e-104 |
| AT1G09180.1 ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1); GTP binding | 906 | 7e-098 |
| AT1G02620.1 GTP-binding protein (SAR1A) | 537 | 5e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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