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Information for unigene UN17285

FASTA Sequence
Unigene ID: UN17285Length: 687  SNP
GGACTACCCCGTCTCTGAAACTCTCTTAAGGACGAAATAAAGGCAAAAGGTTCGAGCGAAATGGCAACAAAGAACAACAGAACCGA
CGATGTCTTATCCACTCAACAAGAAGAGTCTGCCTCTGGTGCAAACAAATACCGTGGACTCGTGCTAAAGAAAAAGCCTCTTATCT
CGCAGGATCCCAAACGTACTTGGTTTGATTCCGCAGATTGGGCTTTACACAAGCAAGAAGCAAGCCCAGATGAAAGAACAATAGCA
GCAATCGAAAATTTAAAACCCAAATATTTTCATATACCTCGAAAGGAACTTCCCCCTACCTTTGCATCTGGACAAGAGATTCAGAC
AGATTCAAGCGTTTAGGGTGCAACGCAAAAAGGGTTTAATGTGGAAATGGAACATGATTGGTTTGGTGTGAGCCAACTCACGTGTA
TCATACTTCCATAAAAGCTCTTATGCAGTTGTTGTGTTTTGCCTCCTGGCCTTTATAAATACTTATAAAATACTTATCGTTTCAAT
AAATGTTTAAAACATTGACATTTGTTGCTGCTTCTTCATTTTCTCTCTCTTTAATATATACAGTAAATCTTAGTGGGGTTTTAGTT
TTTATTTAAACAGAAAACATTTATAACTCAAAATTTGATGACTCTGACTTTAAACCAATAAAATGATTGTCAAGCATCTCTCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868157 hypothetical protein ARALYDRAFT_355149 [Arabidopsis lyrata subsp. lyrata]3111e-026
AAM64550 unknown [Arabidopsis thaliana]3092e-026
NP_567486 cAMP-regulated phosphoprotein 19-related protein [Arabidopsis thaliana]3012e-025
BAC43640 unknown protein [Arabidopsis thaliana]2941e-024
XP_002519193 conserved hypothetical protein [Ricinus communis]2034e-014

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LBU4 Putative uncharacterized protein3091e-026
Q8GW58 At4g161462947e-025
B9RZM4 Putative uncharacterized protein2032e-014
B9HWX1 Predicted protein1934e-013
B6TZJ1 Putative uncharacterized protein1853e-012

Arabidopsis top hits (Blast detail)Scoree value
AT4G16146.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3017e-028
AT5G64130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 93 Blast hits to 93 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1403e-009
AT1G69510.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1323e-008
AT1G69510.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1323e-008
AT1G69510.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1323e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  50%
 
84  33%
 
92  17%

Unigene MembersMember information