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Information for unigene UN17288
| FASTA Sequence |
| Unigene ID:UN17288 |
Length: 1578 |
GGATCAAAACTGTTCATGTTATTATCTTGATGCACTCTGGTGTTTCTTTCTCGATTAATATAATCTCCTAGTTGACAAGGATGAAA
TCGGAGACTGTTATGCTTAAGAACATTGGTGTTTAGGCAGTAAACAACTTTGTTTTCAAATCCTTAAAGAGAACAAACAGAAAATT
ATTTCAGAGAAAACCACATAGCAATAACACAGAGATATATTCCTTCCTACTTCCAGAGCTTACGCAAAGACATGTTCTTCTCTGTG
TCTTTCTTCATAACCTTCCCCACTGCCATCTCAAAGTCTTCCTGTGTCACGTGTACTCTCCTCTCCCGCAGCGCAAACATGCCCGC
CTCCGTGCACACCGCCTTCAGCTCAGCACCCGAGGCACCATTCATCTTCTCTGCAATCTTTTTCAGATCAATTCCACGCATCAAAT
TCATCTTCCTCGAGTGAATCTTCAAGATATCAAAACGTGAATCTTCATTAGGATTGGGGAATTCGATTTTCCTATCAATCCTTCCT
GGCCTGAGAAGAGCTTGATCCAGAATATCAATACGATTTGTCGCCATCAAAACCTTGATTTTGTTTGACGCTTCGAATCCGTCAAG
TTGATTGAGAAGCTCAAGCATAGTCCGTTGCACCTCACTGTCACCGTTTCCACTTCCAGATTCCATACGAGCAGACCCGATACTAT
CGATCTCATCCATGAAGATGATTGATGGTGCATGCTCCCTTGCCATCACGAAAAGTTCTCGGACCATTCGAGAACCTTCTCCAATG
TACTTCTGGACCAGCTCGGAACCAGAAACTCTGATGAACGTACAATCAGTGTGATGTGCCACAGCTCGAGCCAAAAGTGTCTTCCC
AGTTCCAGGTGGACCATATAACAACACACCCTTTGGCTGCGCAATTCCAAGAGACTCGAACAGTTCAGGATGCTTGATTGGCAGCT
CAATGACCTCCTTTATTTCCTTAATTTGCTGGTCAAGACCACCAATCATGTCATATGTAGAGTCGGGAACCTTCTCAACCTTCATA
AGGTTGACTAGCGGATCAACTTTACTCGGCAGGACGAGGTGGAGAACATAGCTATCGTTACGAAGAGCAACTCTTGTTGATGGTGT
GATTTTCGTAATGTCTATGCTTTTGTCAATATCAACGACATACTTCCCCTCTGGATGAACCTTAACCAAGACCTTGTTTTTTCCCA
TCACTTTGACCACTTCACCGACATAGGAACCAGGTTCCTGAAGTAGCTGCAACTCTTCTCTGAGCATTCGTACTCGAGAATTGAGT
TCGTTCCTCTGAGCTTCAAGGCGATTGAGGTTGTTAGTTTTCTGGCGGAGCTGGCGCTGGAGCTCATGGATGTGCTGGAGATAGTA
CTGCTTGAGCCCCTCCCCTTGTTTCGCCGCCGCTATCTTGATGTTGCAGGTTTCCTCCACCGCAGTCTCCGGACGCATCGACTCCA
CTCCTACGGCAGCCATATCCTCTCCTCAATGATCGTCGCGAGTATTGTGATGTTGATGAAACTCACAAGGAGAAAGAGAGAGCAGT
GTTGTTTTCGATCGGAATCTGAAAAAAAAA |
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| GenBank top hits (Blast detail) |
Score | E value |
|---|
| NP_568389 regulatory particle triple-A ATPase 6A [Arabidopsis thaliana] | 2083 | 1e-231 | | XP_002871914 ATSUG1 [Arabidopsis lyrata subsp. lyrata] | 2075 | 1e-230 | | XP_002871915 ATSUG1 [Arabidopsis lyrata subsp. lyrata] | 2060 | 6e-229 | | ABW81135 unknown [Capsella rubella] | 2052 | 5e-228 | | AAF22526 26S proteasome AAA-ATPase subunit RPT6a [Arabidopsis thaliana] | 2025 | 7e-225 |
| Swiss-Prot top hits (Blast detail) |
Score | E value |
|---|
| Q9C5U3 26S protease regulatory subunit 8 homolog A | 2083 | 6e-233 | | Q94BQ2 26S protease regulatory subunit 8 homolog B | 2019 | 2e-225 | | P62194 26S protease regulatory subunit 8 | 1669 | 6e-185 | | P62195 26S protease regulatory subunit 8 | 1669 | 6e-185 | | P62196 26S protease regulatory subunit 8 | 1669 | 6e-185 |
| TrEMBL top hits (Blast detail) |
Score | E value |
|---|
| B2BXU8 Putative uncharacterized protein | 2052 | 4e-228 | | A9PG47 Putative uncharacterized protein | 1957 | 4e-217 | | B9HJP6 Predicted protein | 1948 | 4e-216 | | B9HVM8 Predicted protein | 1948 | 4e-216 | | B4G124 26S protease regulatory subunit 8 | 1945 | 9e-216 |
| Arabidopsis top hits (Blast detail) |
Score | E value |
|---|
| AT5G19990.1 RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A); ATPase | 2084 | 4e-234 | | AT5G20000.1 26S proteasome AAA-ATPase subunit, putative | 2020 | 1e-226 | | AT1G53750.1 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase | 879 | 2e-094 | | AT1G45000.1 26S proteasome regulatory complex subunit p42D, putative | 855 | 1e-091 | | AT5G43010.1 RPT4A; ATPase | 854 | 2e-091 |
| EST library breakdown for ESTs in the assembly |
| Unigene Members |
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