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Information for unigene UN17292
| FASTA Sequence |
| Unigene ID: UN17292 | Length: 824 |
| SNP | GGATTTTCATTGATATATATAGTTGTTTGTGTGTGTATGAAGTCTATAGCCGATCGTCGTCAGAAAAAAAAGAAAAAAAAAAGAAG
TCTATAGACGATAAATCTTGAAAATTTATTCAGATACAGAGTACCCAATTCCTAAACAAAAGGTCTAAAACTATCAGAAACAGAAC
CACCGAGAGATATGGATTGTTCATTCATAAGCATAACCGATCTCCAAAGAATGTTCCAAATGCTCGACAAGAACCAAGACGGTCTC
GTGACCCTCGACGAGCTTCATTGGATTCTAGAGAGACTCGGCTGGTCCGAACACACTCCCGAAGAACTCGAACTGTTCGTTGGGAA
AAAGAGCCTCGACTTAGAGGAATTCCTTCGGTTTTACGACGACGCCGTTTCTAATAGGAAGGAAACAAAGAGCAATAGTGTTGTTG
ATAATGACGATGATGCTATTGTGAGTGCGTTTAATGTGTTCGATGTGAACGGAGACGGTTATATTTCGTCGGAGGAGCTTCGAACG
GTGTTGGAACGGCTCGGATTTGAGGAGGAGACAAAGAGTTGGGATTGTGGGAGGATGATTCGAGCTCATGACAAGAATCTTGATGG
TGTTATTGATATTGAAGAGTTTAAGAACATGATGTTACATGTCCAATGATGCTTGCATATGTGTGTATAGTCCGGTGACATGTTTT
GTGTGTTGTGTGTAAACTCCTTAAAAGTAAGTATATATGCTTATATGTTATGTGTTAATGTAAAATATATACATCTCTGTTACTTT
TTTGCCAAATCATATGTTAAGTATAGCCCTCATGGTTGTGATTAAGTTGG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_564143 putative calcium-binding protein CML44 [Arabidopsis thaliana] | 620 | 2e-062 |
| XP_002893175 hypothetical protein ARALYDRAFT_472391 [Arabidopsis lyrata subsp. lyrata] | 616 | 7e-062 |
| AAF87905 Unknown protein [Arabidopsis thaliana] | 570 | 1e-056 |
| XP_002306659 predicted protein [Populus trichocarpa] | 355 | 1e-031 |
| XP_002285886 PREDICTED: hypothetical protein [Vitis vinifera] | 352 | 3e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LPK5 Probable calcium-binding protein CML44 | 620 | 1e-063 |
| Q0DZP5 Probable calcium-binding protein CML17 | 230 | 2e-018 |
| Q9LX27 Calmodulin-like protein 4 | 204 | 2e-015 |
| Q9FI19 Probable calcium-binding protein CML43 | 202 | 3e-015 |
| O22845 Calmodulin-like protein 5 | 198 | 9e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H7K0 Predicted protein | 355 | 8e-032 |
| C6T3C6 Putative uncharacterized protein | 328 | 1e-028 |
| B9GTZ1 Predicted protein | 316 | 3e-027 |
| D5A8C1 Putative uncharacterized protein | 249 | 2e-019 |
| C5YTT8 Putative uncharacterized protein Sb08g007280 | 241 | 1e-018 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G21550.1 calcium-binding protein, putative | 620 | 9e-065 |
| AT3G59440.1 calcium-binding protein, putative | 204 | 2e-016 |
| AT5G44460.1 calcium-binding protein, putative | 202 | 3e-016 |
| AT2G43290.1 MSS3 (multicopy suppressors of snf4 deficiency in yeast 3); calcium ion binding | 198 | 8e-016 |
| AT4G03290.1 calcium-binding protein, putative | 194 | 2e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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