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Information for unigene UN17299

FASTA Sequence
Unigene ID: UN17299Length: 686  SNP
GGGCCGGCACAAGTCTCATTCTCTCTATTCCGCCGCTGTCTAGTTATTAAATTTGCTAGGAGATCGAAATGACAACAGTTCCAGGA
CAGCTGGTGTGGGAGATCGTGAAGAGAAACAACTGTTTCTTGGTGAAACAGTTCGGTAGAGGCAATGCTAAGGTTCAGTTCAGCAA
GGAGAGCAACAACCTCTGCAACCTCAACTCTTACAAGCACTCTGGTTTGGCAAACAAGAAGACCGTGACCATTCAGCCAGCAGACA
AGGATCAAGGTGTGGTGCTTGGAACAACCAAAACCAAGAAGCAAAACAAGCCAAAGCTCTCTGTTAACAAGTCTGTCCTCAAGAAG
GAGTTCCCAAGGATGGCCAAAGCTGTTGCCAACCAGGTTGTGGACAACTACTACAGGCCTGATTTGAAGAAGGCAGCGCTTGCTAG
GCTCAGCGTGATCAGCAAAGGCCTCAGAGTCGCCAAGTCTGGCCCCAAGAGGAGGAACAGACAGGCTTGAAGAATCCTCCGCCATT
GAATGAATATCTTTCTTCTAAATAAGCTCGTTTTGAGAGTTTCAGACTGTGTTTGTAGGCTAAAGATTATTCCTGAACAGCTAAAA
GTTTTGTTTGAACCACCAACCTTGTCATCCTTCTATTCACAAATGAAGTTAAAACTATTATTATACTGCCATCGTTTTAACCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867410 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6892e-070
ACF23027 ST45-109 [Eutrema halophilum]6765e-069
NP_194670 60S ribosomal protein L28-2 [Arabidopsis thaliana]6731e-068
NP_179563 60S ribosomal protein L28-1 [Arabidopsis thaliana]6542e-066
XP_002886025 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6452e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q9M0E2 60S ribosomal protein L28-26735e-070
O82204 60S ribosomal protein L28-16549e-068
Q962T2 60S ribosomal protein L281978e-015
Q3T0L7 60S ribosomal protein L281808e-013
P46779 60S ribosomal protein L281781e-012

TrEMBL top hits (Blast detail)Scoree value
B4YYB0 ST45-1096763e-069
B9MST4 Putative ribosomal protein L285913e-059
A9P9G9 Predicted protein5814e-058
B9RKC5 60S ribosomal protein L28, putative5771e-057
A9P8K5 Predicted protein5715e-057

Arabidopsis top hits (Blast detail)Scoree value
AT4G29410.1 60S ribosomal protein L28 (RPL28C)6744e-071
AT4G29410.2 60S ribosomal protein L28 (RPL28C)6744e-071
AT2G19730.1 60S ribosomal protein L28 (RPL28A)6556e-069
AT2G19730.2 60S ribosomal protein L28 (RPL28A)6556e-069
AT2G19730.3 60S ribosomal protein L28 (RPL28A)6556e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  24%
 
712  57%
 
84  19%

Unigene MembersMember information