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Information for unigene UN17306

FASTA Sequence
Unigene ID: UN17306Length: 474  SNP
TTCGTTTGGGGCAGCTATAAAAGATGACAGAGGGAGAAGAACCCATTGTATATTTTTATAATCAGCATGTATTACATAAAGATTAT
CTGATCATAATCAGATTATTTCTTCTTCCGTCTTATTCACTTTGCCTACACGTACAAAACCGTGACGTAGTATAAATTGATAGAAA
CATCAATTTTTTTTTTTGTATAAGCTTATTTAGTTTAAGTAGTAGGTGAAGAGAGACACAAGGGAAGCTCCAACCAAAGAGCCAAG
AGCCGGTACGGCTACGGAGGCTCCACTTGCGGCGGGTCCTGGTGCCGGAGCTCCAACCTCTGTGGCCATGACGGTGGTCATGGAAG
CAGCAGCGAAAAGAACTCCACAGGCAATCTTCTTCATCTCCATTTCTAGTTGAGACCTGAAAGTTTTTTTTCTTTTTGTTTTTTAG
TGGTAGTTTTGTTTCTTTCTTTTTTTGTTTCTTGCAGGTCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_973662 uncharacterized protein [Arabidopsis thaliana]2791e-023
XP_002879957 expressed protein [Arabidopsis lyrata subsp. lyrata]2754e-023
XP_002876432 expressed protein [Arabidopsis lyrata subsp. lyrata]2575e-021
NP_191328 arabinogalactan protein 23 [Arabidopsis thaliana]2371e-018
AAM18712 arabinogalactan-peptide AGP23 [Arabidopsis thaliana]2315e-018

Swiss-Prot top hits (Blast detail)Scoree value
Q8S2W4 Arabinogalactan peptide 232379e-020

TrEMBL top hits (Blast detail)Scoree value
Q3EBI2 At2g419052799e-024
Q9XEY8 Pollen-specific arabinogalacta protein BAN1022198e-017
B9HNM7 Predicted protein1921e-013
B9N6U6 Predicted protein1741e-011
B9RHE9 Putative uncharacterized protein1722e-011

Arabidopsis top hits (Blast detail)Scoree value
AT2G41905.1 unknown protein2801e-025
AT3G57690.1 AGP23 (ARABINOGALACTAN-PROTEIN 23)2387e-021
AT3G20865.1 AGP40 (arabinogalactan-protein 40)1088e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  17%
 
711  61%
 
64  22%

Unigene MembersMember information