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Information for unigene UN17309
| FASTA Sequence |
| Unigene ID: UN17309 | Length: 1065 |
SSR | SNP | GGACACAAACCCTTCTTCTCTCTTCCCATTTCTTCGCTGCAGAGAGAGAGAGAGAGAGAGAGAGATTCAAAAATGCTTCTCAAAGC
TGCTTCTTCGTTCTCCCTCATGAACGTTCACGGAGTGAAGAAGGACATCTCTCCTCTCTTCACCTCCGGGAAAAACCTCTCCTTCT
CTGTTCGCGCCTCCACGCAGCCACTAAGCGGCGTCGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTTCG
AGTCCGCAGATCTCTCTTGCTCGACATATGTACTCCCCTGAGTGCGAAGCCGCCGTGAACGAGCAGATCAATGTTGAATACAACGT
GTCTTATGTGTACCACGCTTTGTACGCTTACTTCGATCGTGACAACGTTGCTCTCAAAGGTCTTGCCAAGTTTTTCAAGGACTCGA
GTGTGGAAGAACGAGACCACGCTGAGATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAACTACAGCCTATGGTGATG
CCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTCTCTATGCCATGGAGTTGGCTCTATCATTGGAGAAACTGGTCAATGA
AAAACTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGCTGATTTCATTGAGAGCGTGTTTTTGAACGAAC
AGGTTGAAGCAATTAAGAAAATCTCGGAGTACGTCTCTCAACTAAGAAGACTCGGCAAAGGACATGGGACATGGCATTTCGATCAG
GAGCTTCTCTAATAAACTGCTGCTGCTTAAGCTATTTTTGGTTGTAATCTCTAATAAACTGCTGCTCCTGCTTGATCTATGGTTGT
TGTACTCTCTTTAGAAACTGGTGTTGCTTAATCACTTTTGGCTGAGGGTAATTTTTAAGCGTTTAGTTTTGTTTACTCACAAACCT
TTGACTTGAGTAATATTTTCATTTAGAAAATATCTTACTATCAACGGTTGTTTAACTTGAGGTCTATATTTCATCAAAAACTGTTT
AAGTGAAAATCAATGTTAAGCAAATTTATATCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001146869 ferritin-1 [Zea mays] | 1018 | 2e-108 |
| BAJ34006 unnamed protein product [Thellungiella halophila] | 1004 | 1e-106 |
| ABB22752 ferritin [Chorispora bungeana] | 993 | 2e-105 |
| XP_002878066 ATFER3 [Arabidopsis lyrata subsp. lyrata] | 986 | 1e-104 |
| NP_191168 ferritin 3 [Arabidopsis thaliana] | 977 | 1e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYN2 Ferritin-3, chloroplastic | 977 | 6e-105 |
| Q9S756 Ferritin-4, chloroplastic | 878 | 2e-093 |
| Q948P6 Ferritin-3, chloroplastic | 865 | 6e-092 |
| Q8H1T3 Ferritin-2, chloroplastic | 844 | 2e-089 |
| Q41709 Ferritin-2, chloroplastic | 836 | 1e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56090.1 ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 977 | 5e-106 |
| AT2G40300.1 ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 878 | 2e-094 |
| AT3G11050.1 ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 823 | 4e-088 |
| AT5G01600.1 ATFER1; ferric iron binding / iron ion binding | 759 | 1e-080 |
| AT3G61010.1 glycosyl hydrolase family protein 85 | 193 | 4e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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