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Information for unigene UN17309
FASTA Sequence |
Unigene ID: UN17309 | Length: 1065 |
SSR | SNP | GGACACAAACCCTTCTTCTCTCTTCCCATTTCTTCGCTGCAGAGAGAGAGAGAGAGAGAGAGAGATTCAAAAATGCTTCTCAAAGC
TGCTTCTTCGTTCTCCCTCATGAACGTTCACGGAGTGAAGAAGGACATCTCTCCTCTCTTCACCTCCGGGAAAAACCTCTCCTTCT
CTGTTCGCGCCTCCACGCAGCCACTAAGCGGCGTCGTTTTCGAGCCGTTTGTGGAAGTGAAGAAGGAACTCGATCTCGTCCCTTCG
AGTCCGCAGATCTCTCTTGCTCGACATATGTACTCCCCTGAGTGCGAAGCCGCCGTGAACGAGCAGATCAATGTTGAATACAACGT
GTCTTATGTGTACCACGCTTTGTACGCTTACTTCGATCGTGACAACGTTGCTCTCAAAGGTCTTGCCAAGTTTTTCAAGGACTCGA
GTGTGGAAGAACGAGACCACGCTGAGATGTTGATGGAGTATCAGAACAAACGTGGTGGGAGGGTTAAACTACAGCCTATGGTGATG
CCTCAGTCTGAGTTTGACCACGCTGAGAAAGGAGATGCTCTCTATGCCATGGAGTTGGCTCTATCATTGGAGAAACTGGTCAATGA
AAAACTCCTAAACCTGCACAGTGTGGCTTCCAAGAACGATGATGTCCAGTTGGCTGATTTCATTGAGAGCGTGTTTTTGAACGAAC
AGGTTGAAGCAATTAAGAAAATCTCGGAGTACGTCTCTCAACTAAGAAGACTCGGCAAAGGACATGGGACATGGCATTTCGATCAG
GAGCTTCTCTAATAAACTGCTGCTGCTTAAGCTATTTTTGGTTGTAATCTCTAATAAACTGCTGCTCCTGCTTGATCTATGGTTGT
TGTACTCTCTTTAGAAACTGGTGTTGCTTAATCACTTTTGGCTGAGGGTAATTTTTAAGCGTTTAGTTTTGTTTACTCACAAACCT
TTGACTTGAGTAATATTTTCATTTAGAAAATATCTTACTATCAACGGTTGTTTAACTTGAGGTCTATATTTCATCAAAAACTGTTT
AAGTGAAAATCAATGTTAAGCAAATTTATATCG
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GenBank top hits (Blast detail) | Score | e value |
NP_001146869 ferritin-1 [Zea mays] | 1018 | 2e-108 |
BAJ34006 unnamed protein product [Thellungiella halophila] | 1004 | 1e-106 |
ABB22752 ferritin [Chorispora bungeana] | 993 | 2e-105 |
XP_002878066 ATFER3 [Arabidopsis lyrata subsp. lyrata] | 986 | 1e-104 |
NP_191168 ferritin 3 [Arabidopsis thaliana] | 977 | 1e-103 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LYN2 Ferritin-3, chloroplastic | 977 | 6e-105 |
Q9S756 Ferritin-4, chloroplastic | 878 | 2e-093 |
Q948P6 Ferritin-3, chloroplastic | 865 | 6e-092 |
Q8H1T3 Ferritin-2, chloroplastic | 844 | 2e-089 |
Q41709 Ferritin-2, chloroplastic | 836 | 1e-088 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G56090.1 ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 977 | 5e-106 |
AT2G40300.1 ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 878 | 2e-094 |
AT3G11050.1 ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 823 | 4e-088 |
AT5G01600.1 ATFER1; ferric iron binding / iron ion binding | 759 | 1e-080 |
AT3G61010.1 glycosyl hydrolase family protein 85 | 193 | 4e-015 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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