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Information for unigene UN17315
| FASTA Sequence |
| Unigene ID: UN17315 | Length: 608 |
SSR | | GAGAACACAGAGATCGGTCGAGAGAGAGAGAGAAGAAGAGAAGTTTGATCTTGTGAGAGAAAATGGCTGCTTCAGTGATGCTTTCA
TCAGTGACATTGAAACCTGCGGGTTTCACGGTGGAGAAGATGTCGGCGAGAGGATTACCGTCGCTCACAAGAGCTTCTCCTTCTTC
CTTCAGAATCGTCGCGAGTGGCGTCAAGAAGATCAAGACAGACAAGCCCTTTGGAGTTAACGGCAGCATGGACTTGAGGGACGGCG
TCGACGCTTCCGGCAGAAAGGGCAAGGGATATGGTGTTTACAAATTCGTGGACAAGTACGGTGCTAACGTTGATGGATACAGCCCT
ATCTACAACGAGGACGAGTGGTCAGCGAGTGGTGACGTGTACAAGGGAGGACTCACTGGTTTGGCGATTTGGGCGGTGACACTCGC
CGGAATTCTTGCCGGAGGGGCTCTTCTTGTGTACAACACTAGTGCTTTGGCTCAGTAAAATCTTGAAAGTGTGTGTACTTATTATG
CTTATCTGTTTTTAGCGTCATTGTTCTGTTCTATGTAATGTTGTTAAGTAACTTAAAGAACATACTTTGAATATATATAACCTCTA
GTGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P49108 RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic; Flags: Precursor | 712 | 2e-073 |
| ABM54168 PSII 10Kd peptide [Brassica juncea] | 699 | 8e-072 |
| ABL97960 photosystem II 10kDa polytpeptide [Brassica rapa] | 678 | 2e-069 |
| AAO32060 photosystem II 10kDa polypeptide [Brassica rapa subsp. pekinensis] | 669 | 2e-068 |
| NP_178025 photosystem II subunit R [Arabidopsis thaliana] | 665 | 7e-068 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49108 Photosystem II 10 kDa polypeptide, chloroplastic | 712 | 1e-074 |
| P27202 Photosystem II 10 kDa polypeptide, chloroplastic | 670 | 9e-070 |
| Q40163 Photosystem II 10 kDa polypeptide, chloroplastic | 561 | 4e-057 |
| P06183 Photosystem II 10 kDa polypeptide, chloroplastic | 555 | 2e-056 |
| Q40519 Photosystem II 10 kDa polypeptide, chloroplastic | 541 | 9e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1Z271 PSII 10Kd peptide | 699 | 6e-072 |
| A1YN01 Photosystem II 10kDa polytpeptide | 678 | 2e-069 |
| Q84XP6 Photosystem II 10kDa polypeptide (Fragment) | 669 | 2e-068 |
| Q0WWI7 PSII-R protein | 665 | 5e-068 |
| B4YYB9 ST244 | 662 | 1e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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