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Information for unigene UN17317

FASTA Sequence
Unigene ID: UN17317Length: 865  SNP
ATTTTAAATGTTATAACTTATTGTCAAAGTATAAAGTCTGGGCTAACAGGCTAACAGAGAAAGATAACCCACGATATTATTAAACA
TGAAGTTATAGTTTAGGAGGTATACTAAAACAAGAGCACATGTATAACACAATTACACACATAAATGGATTGTCTTGGATCACTTC
ACACATGGAAGCTAACATTATTTCACTTCTCACCGAGTCTGACAATACTTTGAGTGAGATAATTGATTCAGACCTTGATCTTAGGC
TTCTTCACGATCATCACCGAGCAATGAGCATGATGAGCACAGTAATCACTGACGCTACCGAGAACCGCCCTCTTGATAGCTCCATA
ACCGTGGCTTCCTACAACGAGAAGAGAAGCATGGTGTTTATCAACAACCTCGCAAAGGATGTTCCTTGCATCGCCTTCAAAAACTT
CTATCATTGCGCCATGAACCGACTTGCTCTGACAGAGTGCTTTGGCTTTCTCGACAACCTTAACAGCGGTATGCTTCAAATCAGCA
TCAACATAAGGCACAACCTCCGCAGTACCGGGGCCAGCGAGACCAACGGCGGAGACGGCGTTAGGTTTGGCGTGGACGATGATGAG
CTTGAAAGGGAAATTGGGAGCGTAGGGAGCGAAGAAACGATCGAGAGTCCACTCCATTGCGTAGGTGCTCTGCTCACTTTCGTCCA
CACCAACTACCATCACTGGTTTCTCCTCTCCAGTAGCCATCACTCGAAGGCGCTGATCTGTTGCCCTCGCTTAGAAGATCCTAGAA
TGTGAGCACAGAAACCAATGCTTTCTCCCCCCCCGTAGATCCAGAATACAAACAAGTATTATTGATGACAAAAGGAAGTATCTGTG
TACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882129 universal stress protein family protein [Arabidopsis lyrata subsp. lyrata]8013e-083
BAJ33672 unnamed protein product [Thellungiella halophila]7951e-082
NP_566108 adenine nucleotide alpha hydrolases-like protein [Arabidopsis thaliana]7914e-082
AAM63890 unknown [Arabidopsis thaliana]7772e-080
ABV89633 universal stress protein family protein [Brassica rapa]7654e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q57951 Uncharacterized protein MJ05311423e-008
Q8LGG8 Universal stress protein A-like protein1389e-008

TrEMBL top hits (Blast detail)Scoree value
O82240 Expressed protein7913e-082
Q8LC26 Putative uncharacterized protein7771e-080
A8IXL9 Universal stress protein family protein7653e-079
B9SAP9 Putative uncharacterized protein6391e-064
Q6T7D1 Fiber protein Fb19 (Fragment)6238e-063

Arabidopsis top hits (Blast detail)Scoree value
AT2G47710.1 universal stress protein (USP) family protein7921e-084
AT5G49050.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: universal stress protein (USP) family protein (TAIR:AT2G47710.1); Has 83 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2982e-027
AT3G11930.4 universal stress protein (USP) family protein2481e-021
AT1G09740.1 ethylene-responsive protein, putative2444e-021
AT3G11930.1 universal stress protein (USP) family protein2444e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  8%
 
93  25%
 
103  25%
 
74  33%
 
111  8%

Unigene MembersMember information