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Information for unigene UN17320

FASTA Sequence
Unigene ID: UN17320Length: 1297  SNP
TTTTTGTTTTTAGGGTTTCTCCTTTTCTCCTCCTAACTCACACAACACTCTCCCGAGGTTAAAGCGACGGCGCTACTTCGCTGTCC
GCCTTGTACGAGCTCGAGCTTCGTCTAGGCCCTCCTCACTTTTTTTCTTATCTTTTACCATCCCCTCTCAATCAAAATGGCGGTGA
AAGCAACAAAGGCGGAGAAGAAGATCGTGTACGACTCGAAGCTGTGCCAGCTTCTGAATGAGTATCCTCAGATCCTCATCGTCGCG
GCGGATAACGTCGGGTCCACTCAGCTCCAGAACATACGGAAAGGTCTCCGCGGAGATTCCGTTGTTCTCATGGGGAAGAACACTAT
GATGAAGAGATCTGTTAAGCTTCATGCTCAGAAGACGGGGAACGATGGGTTCCTCAATCTCATGCCTCTTCTTCAGGGGAACGTTG
GGCTTATCTTTACCAAGGGTGACTTGAAGGAAGTCAGTGAGGAGGTTGCTAAGTACAAGGTTGGAGCTCCAGCTCGTGTTGGCTTA
GTTGCTCCAATTGATGTGGTTGTGCAACCAGGCAACACTGGCCTCGACCCATCGCAGACCTCTTTCTTCCAAGTGCTCAACATTCC
AACCAAGATCAACAAAGGCACGGTTGAGATCATAACCCCTGTGGAGCTCATCAAGAAAGGCGACAAAGTCGGTTCATCCGAGGCAG
CTCTTCTAGCCAAGCTCGGTATCAGGCCGTTCTCTTATGGTCTCGTCGTGGAGTCGGTCTACGACAACGGCTCTGTGTTTGACCCT
GAGGTGCTTAACCTCACTGAAGACGACCTTGTTGAAAAGTTTGCAGCTGGTGTCTCGCTGGTGACCGCGTTTTCTCTTGCCATCTC
TTACCCAACCATAGCAGCTGCCCCTCACATGTTCCTCAATGCTTACAAGAATGTTCTTGCTATTGCATTGGCTACTGAGTATTCTT
TCCCTCAGGCTGAGAATGTGAAGGAGTTCCTCAAGGATCCAAGCAAGTTTGCTGTTGCTTCGGCGGTTGCACCTGTTTCAGGAGAA
TCTAGTGGAGCTCCTGTGGTGGCAGCTGTGGAGGAAGAAGCTGCGGAGGAGTCTGATGGAGACATGGGATTCGATCTGTTCGGCTA
AAATATGCCCGTCTTAAGCTTTGCACCTGTTATTTTTATGATTATCAGTTTAAGTTTAACTTTTTATTAAAATTTACTTTCAGAAT
TTTGTTGTTGCAATTTATGGATATTTTATTTTATCTATCAAAAAGTGTTTTCTGTGTTATGTACCGATATATATGATCGAGATATT
CTATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181530 60S acidic ribosomal protein P0-1 [Arabidopsis thaliana]14727e-161
XP_002881693 60S acidic ribosomal protein P0 [Arabidopsis lyrata subsp. lyrata]14701e-160
XP_002268645 PREDICTED: hypothetical protein [Vitis vinifera]13284e-144
CAN80537 hypothetical protein VITISV_003812 [Vitis vinifera]13203e-143
XP_002315165 predicted protein [Populus trichocarpa]13194e-143

Swiss-Prot top hits (Blast detail)Scoree value
O04204 60S acidic ribosomal protein P0-114723e-162
P50346 60S acidic ribosomal protein P013147e-144
Q42112 60S acidic ribosomal protein P0-213121e-143
P57691 60S acidic ribosomal protein P0-312976e-142
P41095 60S acidic ribosomal protein P012511e-136

TrEMBL top hits (Blast detail)Scoree value
A5AXI6 Putative uncharacterized protein13202e-143
B9HSR0 Predicted protein13193e-143
C6TGA6 Putative uncharacterized protein13193e-143
B9HHM2 Predicted protein13166e-143
B9SLK4 60S acidic ribosomal protein P0, putative13166e-143

Arabidopsis top hits (Blast detail)Scoree value
AT2G40010.1 60S acidic ribosomal protein P0 (RPP0A)14794e-164
AT3G09200.1 60S acidic ribosomal protein P0 (RPP0B)13121e-144
AT3G11250.1 60S acidic ribosomal protein P0 (RPP0C)12975e-143
AT3G09200.2 60S acidic ribosomal protein P0 (RPP0B)10342e-112
AT1G25260.1 acidic ribosomal protein P0-related1362e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  21%
 
88  28%
 
124  14%
 
98  28%
 
103  10%

Unigene MembersMember information