 |
Information for unigene UN17336
| FASTA Sequence |
| Unigene ID: UN17336 | Length: 1191 |
SSR | | GGGAAACAGAGAAGGAGAAATAGAGAGAGACTCCGAGAAAGGTCATCCCGAAGATTTGTTCGCATCTGATTCCTCCGATCTCCCAT
GGCTAAGAGGTTTTATTAACAACAGTATAAGAGCTTTCGCTGGGTGAAGGAGAGAGAGAGAATAGATCTCTTTTAACAACCTTCCC
GCGCCTCGATTAAACGAGTCAAAAGTCTCACACTTTAAGAGTTTTCGAGAAGGATTAGAAAAATGACAGATATATCGAGCTTCTGG
GGTCCAGTGACTTCCACCATAGAGTGTTGTGAGAAGAACTACGCCTACTCCTCTTACATCGCAGAGTTCTACACACCATCTCCAAC
GTCCCTGGGATCTCTTGGCTCTCATCGGTCTCGTCAATGCCTTGAGGCAACGGTTCGAGAAGAGGTTCAGCATCCTCCACATTTCC
AACATGATTCTCGCTATCGGCAGCATGCTCTACCATGCCACTTTGCAGCACGTGCAACAGCAGAGCGATGAGACGCCGATGGTGTG
GGAGATACTTCTCTACATGTACATCCTTTACTCGCCGGACTGGCATTACAGAAGCACCATGCCCACTTTTCTCTTCCTCTACGGTG
CTGCTTTCGCTGCTGTCCACGCTTTCCTCAGGTTTGGGATCGGTTTCAAGGTCCACTACGTGGTCCTCTGTCTTCTCTGCATCCCT
CGGATGTACAAGTACTACATTCACACCGAGGACACCGCGGCTAAAAGGATTGCTAAGTGGTATGTCGCCACGATCCTGGTGGGGAG
TGTTTGCTGGTTCTGTGACCGTGTTTTCTGTAAGAGGATATCTCAGTGGCCTGTGAATCCTCAGGGACATGCTCTGTGGCATGTGT
TCATGAGTTTCAACTCCTACTGTGCGAACACGTTCTTGATGTTCTGTCGAGCTCAGCAGCGTGGATGGAATCCGAAGGTTAAATAC
TTTCTGGGAGTTCTTCCTTACGTCAAGATCGAGAAGCCAAAAACTCAATGAGGGGAAAAGAGCCCAGGAGATCATAAATATAGTTT
TTTTTTTGTTCATCGTTTTGTCAGAAATTTCGACGTTGGTTTTCATTTTTGGGAAGTGAAAGTACTCTCAGAGTCTAGATTTTTTT
TGTTCTTTGTATTAGTTTTCTTGGGGATGAATGGATGATGATCTTATGAAGAATTGATTTCTTAACTTGCTGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567660 dihydroceramidase [Arabidopsis thaliana] | 1149 | 2e-123 |
| CAA16783 putative protein [Arabidopsis thaliana] | 1149 | 2e-123 |
| XP_002869828 ATCES1 [Arabidopsis lyrata subsp. lyrata] | 1149 | 2e-123 |
| XP_002331534 predicted protein [Populus trichocarpa] | 1017 | 4e-108 |
| XP_002518399 alkaline phytoceramidase, putative [Ricinus communis] | 1003 | 2e-106 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49638 Putative uncharacterized protein AT4g22330 | 1149 | 1e-123 |
| Q94IB9 Acyl-CoA independent ceramide synthase | 1149 | 1e-123 |
| B9N8I5 Predicted protein | 1017 | 3e-108 |
| B9RXD0 Alkaline phytoceramidase, putative | 1003 | 1e-106 |
| B9P606 Predicted protein (Fragment) | 999 | 3e-106 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G22330.1 ATCES1; catalytic/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1150 | 5e-126 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
