 |
Information for unigene UN17338
| FASTA Sequence |
| Unigene ID: UN17338 | Length: 1049 |
| SNP | CCGTGGCTCTCACCCTCATGTTTGACCAAATTGACTATTTATTCTCTCGTATGTAAGTAAATAATCTCCAAAAGCTTATTTCGAAG
CAAACAACAATTGGAAACAAAATGCAATGACAAATTTCAAAAAAAACGACAATGTAATTGTTTCCCAGGTGGAGGGGGTCATAATG
TTTTATTTTGTCAACTGGGTTTGCAGCATCACACAAACATGTTTCTTAAGGGAAAACTCTCTCGAGGAGGGATAGATTTTCAGAGG
TTGCTGAGGTCAACAGGTTCACGGAGGAGCCTCTCCATCTGCTGTGCTCTTGTCCTGATTGACATGTCCAACACCTTTTGTTGGAA
CTCTACTATTAGCCCTCCATAGATACTCGGATCAATCTTCTGTTCCACAGTTACTTTCTTCCCTTCTCCAATGATCTCCTGAAGTG
TCTCCTTAAGTTCCTTTTCCTCGGCAGGAGGAAGTGGCATGACAGTGGTAACCAAGACTTTGACGTCTCCCCTATGTGCTGTTGTC
AGCTGCATGAATTTTTTCACAATCACGTCTAGGTTCTTCAGCTTTCCATTCTCAGCTAACAAAGAGAGGAAGTTCTTGGTGGGTTC
TGCAAACTTTGCTTTGTCACAAACATCGACAATAGCAGCAAGTCTTGTCTCTCTAGGAACAGAGGGATCCTTAGTAAACTGTGAGA
AAGTAGGGCTGGTCTTCATCGCCTCAACCAGCTCAGAAAGATCCGACTCAATCTTTTCCAAGGAATTCATCTTCACAGCTGCAATG
TACAGCCACGAAGCAAAGTTGCCAGATTCACCAACTAAAGCCACTGGCACCTTAACATTGCCAGTTTTCTGAGCTGAAGCTGTTGC
ATAATCTCTCAACGCAGGGATAAGAGGCCGTCCACTGGGAAAAGATCTGGCAGAGGAGACGGAATCTGAGACGGCGATGGTCTTGA
AGAAGGAGATCCCGGATCTGATACGACCAGCCAAAGCCATTTTTGTTGTTGTTGCAGATATCTGATTGGAACCCTAGCAAATGATT
AAAAGCCGATCAGCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABL97953 hydrogen-transporting ATP synthase [Brassica rapa] | 1177 | 9e-127 |
| XP_002873614 AT5g13450/T22N19_100 [Arabidopsis lyrata subsp. lyrata] | 1029 | 1e-109 |
| NP_196849 ATP synthase subunit O [Arabidopsis thaliana] | 1014 | 7e-108 |
| AAK55728 AT5g13450/T22N19_100 [Arabidopsis thaliana] | 1011 | 2e-107 |
| BAA13600 delta subunit of mitochondrial F1-ATPase [Arabidopsis thaliana] | 992 | 2e-105 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96251 ATP synthase subunit O, mitochondrial | 1014 | 3e-109 |
| P22778 ATP synthase subunit O, mitochondrial | 696 | 2e-072 |
| Q5RD23 ATP synthase subunit O, mitochondrial | 341 | 3e-031 |
| P48047 ATP synthase subunit O, mitochondrial | 338 | 7e-031 |
| Q2EN81 ATP synthase subunit O, mitochondrial | 336 | 1e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13450.1 ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative | 1026 | 1e-111 |
| AT5G13450.2 ATP synthase delta chain, mitochondrial, putative / H(+)-transporting two-sector ATPase, delta (OSCP) subunit, putative | 654 | 1e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
