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Information for unigene UN17343
| FASTA Sequence |
| Unigene ID: UN17343 | Length: 1325 |
| SNP | GGGCAACAGGAGTTGGAGCAACCACTGGTGTATTGATCAAAGGAGGAGATGCGTTGGAGAAAGCTCACAAAGTGAAATATGTAATC
TTTGACAAAACAGGCACCTTAACTCAAGGGAAAGCTACCGTGACAACCGCAAAAGTCTTCTCAGAGATGGACCGTGGAGAATTCCT
CACACTTGTTGCTTCCGCTGAGGCTAGCAGTGAACACCCATTGGCAAAAGCTATAGTTGAGTACGCTCGACATTTCCATTTCTTTG
ATGAATCTGCCGAGGATGGTGAAACAAATAACAAAGCCTCTCAAAACGCTGGATGGTTACTCGATACATCGGACTTCTCTGCTCTT
CCTGGGAAAGGCATTCAGTGCTTAGTCAACAACAAGCTGATTCTGGTGGGAAACCGTAAACTTATGTCAGAAAACTCCATAACCAT
CCCAGACCACGTTGAGAAGTTTGTTGAGGAGCTTGAAGAAAGCGCAAAGACAGGAGTCATTGTAGCCTATAGTGGCCAATTAGTAG
GTGTGGTGGGAGTCGCTGATCCGCTGAAGCGAGAAGCCAATGTTGTTGTGGAAGGTCTACTTAGAATGGGTGTTCGACCTATAATG
GTTACAGGTGATAACTGGAGAACAGCAAGAGCAGTCGCCAAAGAGGTTGGTATTGAAGACGTGAGAGCGGAAGTAATGCCAGCAGG
AAAAGCTGAAGTGATCCGTTCACTGCAAAAAGACGGAAGCACGGTGGCGATGGTTGGAGATGGAATCAATGACTCTCCAGCTCTAG
CCGCTGCTGACGTGGGAATGGCCATTGGTGCAGGGACTGATGTAGCAATAGAAGCAGCTGATTACGTTCTGATGAGAAACAACTTA
GAAGATGTTATTACAGCCATTGATCTCTCTCGCAAAACACTAACACGAATCAGGTTAAACTACGTTTTCGCCATGGCTTACAATGT
AGTGTCGATACCGATAGCAGCAGGAGTGTTCTTCCCGATCCTGAGGGTGCAGCTGCCGCCGTGGGCCGCAGGAGCGTGCATGGCGC
TCTCATCGGTGAGTGTTGTTTGCTCCTCTTTGCTTCTTAGAAGATACAAGAAGCCGAGACTTACCACTATTTTGGAGATTACCAAG
GAGTAAAGTCTTTTTCTTTCTCTTTCTTAATTGGAGTGATTTACTTTTGTTTTGGTTTGTTGTTTGTAATCGATCATGTAACGACA
CGATAAAAAAAATGGTCTTGAGAGATGTTTCTTATCTGTATGTAAGAGATTTTCTCGGCCTTTGTTGTAAAAAAATGGCGTCCTTT
CTTGTGATCGATTGATGTGCATTAGCAAATTAGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAL02122 copper-transporting P-type ATPase [Brassica napus] | 1824 | 1e-201 |
| XP_002863545 responsive-to-antagonist1 [Arabidopsis lyrata subsp. lyrata] | 1767 | 5e-195 |
| NP_199292 copper-transporting ATPase RAN1 [Arabidopsis thaliana] | 1764 | 1e-194 |
| AAK56262 AT5g44790/K23L20_14 [Arabidopsis thaliana] | 1764 | 1e-194 |
| ADN34216 heavy metal ATPase [Cucumis melo subsp. melo] | 1537 | 2e-168 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7J8 Copper-transporting ATPase RAN1 | 1764 | 5e-196 |
| Q9SH30 Putative copper-transporting ATPase 3 | 797 | 6e-084 |
| Q64446 Copper-transporting ATPase 2 | 715 | 2e-074 |
| Q04656 Copper-transporting ATPase 1 | 642 | 6e-066 |
| Q64430 Copper-transporting ATPase 1 | 631 | 1e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q941L1 Copper-transporting P-type ATPase | 1824 | 8e-202 |
| Q94KD6 AT5g44790/K23L20_14 | 1764 | 7e-195 |
| A5B663 Putative uncharacterized protein | 1527 | 2e-167 |
| B9MUN2 Heavy metal ATPase | 1524 | 5e-167 |
| B9GYA1 Heavy metal ATPase | 1498 | 5e-164 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G44790.1 RAN1 (RESPONSIVE-TO-ANTAGONIST 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | 1765 | 3e-197 |
| AT1G63440.1 HMA5 (HEAVY METAL ATPASE 5); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 1031 | 4e-112 |
| AT5G21930.1 PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | 503 | 7e-051 |
| AT5G21930.2 PAA2 (P-TYPE ATPASE OF ARABIDOPSIS 2); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | 503 | 7e-051 |
| AT4G33520.2 PAA1 (P-TYPE ATP-ASE 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | 425 | 7e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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