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Information for unigene UN17344

FASTA Sequence
Unigene ID: UN17344Length: 803 SSR 
CACTAGCCCCTCTCTCCATCTCTTGGTCTCTCACTTGAATCTCTCCTCACAAACACGTAGTACGATTCCTTTTGCTCTCTCCTCTC
TCTCTCTCTACAACCCCTACGATCTTCTTCGTCAAGATTCGAGTATGAAGGGAGGTAAATCAAAGACTGAAACCAGGAGCTCCAAG
CTCTCTGTGGCCAAGAAGCCCGCTAAAGCAGCAGGTCGTAGCAAAGCGGCGGCTAAGGATCCTAACAAACCAAAGAGGCCTGCTAG
TGCCTTCTTCGTGTTCATGGAGGACTTCCGTCAGACTTACAAGAAGGATCACCCCAACAACAAATCTGTTGCTGCTGTTGGTAAAG
CTGGTGGAGAAAAGTGGAAATCCTTGTCTGACTCTGAGAAGGCTCCCTTTGTAGCTAAGGCTGATAAGCGCAAGGTTGAGTATGAG
AAGACCATGAAAGCCTACAACAAGAAGCTGGAGGAAGGTCCAAAGGAGGACGAGGAGGAATCTGACAAGTCCGTGTCTGAGGTGAA
TGATGAGGATGATGCCGATGATGGTAGTGATGAGGAGGAAGACGATGACTAAAGAAGTTGAAGCTGGTAGCATAATAGGGGCGCTA
CAAGGATCTCTGGGATGTTTTTTTTTTTTTTTCTTTCTTATTTACTGATGTTTCAAGTTAGTAAGCTTGCCACTATCTCTCACTGA
TTCTGATTCTACGTGTAATGGAAAAAGTGTGTAGACTGTTTGAATGAGAGATTTGCAGCTCTATGTAACAATTTAGCTTTTCGTTC
TAAAATATGTTATCATCCCTTTCTTCACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33706 unnamed protein product [Thellungiella halophila]6678e-068
NP_564123 high mobility group B2 protein [Arabidopsis thaliana]6444e-065
AAF80615 F2D10.18 [Arabidopsis thaliana]6363e-064
NP_001077569 high mobility group B2 protein [Arabidopsis thaliana]6354e-064
NP_001031074 high mobility group B2 protein [Arabidopsis thaliana]6264e-063

Swiss-Prot top hits (Blast detail)Scoree value
P26585 HMG1/2-like protein5133e-051
P40619 HMG1/2-like protein4659e-046
P40620 HMG1/2-like protein4461e-043
P27347 DNA-binding protein MNB1B4344e-042
P40621 HMG1/2-like protein3582e-033

TrEMBL top hits (Blast detail)Scoree value
O49596 HMG protein6442e-065
Q9LM85 F2D10.186362e-064
A8MQZ3 Uncharacterized protein At1g20693.36353e-064
Q2V4M2 Putative uncharacterized protein At1g20693.26263e-063
P93047 At1g20690/F2D10_156121e-061

Arabidopsis top hits (Blast detail)Scoree value
AT1G20693.1 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6512e-068
AT1G20693.3 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6413e-067
AT1G20696.1 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6352e-066
AT1G20693.2 HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6324e-066
AT1G20696.3 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor6064e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  5%
 
107  33%
 
76  29%
 
86  29%
 
91  5%

Unigene MembersMember information