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Information for unigene UN17348
| FASTA Sequence |
| Unigene ID: UN17348 | Length: 998 |
SSR | | GGGCCTCTCTGACAGCTCAAATTAAAGTTGACTCCTTTGTTTTCCACGCTTTAAAAAAAACTTGCAGCTTTTTCATCTCAAGTCTC
AGTTTCCTTCTACACTTAACCAGAAGCACAAAAAGAGAAAGAGAAGGTAGCTCAGAGAGTACTGTCCTCAAATCTCAATCAATGTC
AGCTTCTGTTGCTGCAGCATCAGTATCAACAACAACAACAACAACAGATACAACGTTTATAAAGTGCGTCACTGTTGGGGATGGAG
CTGTGGGCAAAACTTGTCTTCTTATCTCCTACACCAGCAACACTTTTCCCACTGATTATGTCCCAACGGTGTTTGACAACTTCAGT
GCAAATGTTTTAGTCGATGGCAAAACCGTCAATCTTGGTCTTTGGGATACTGCTGGTCAAGAAGATTACAATAGGCTTAGACCATT
GAGTTACAGAGGAGCAGATGTTTTCATTCTCGCCTTTTCTCTTATTAGCAGGCCTAGCTTTGAGAATATTGCTAAAAAGTGGGTCC
CGGAGCTGCGACATTATGCCCCTAACGTGCCTATTGTTCTAGTGGGAACTAAATTAGATCTTAGAGAAGATAAGAAGTTCCCAATG
AATTATCCAGGTGCTTGCACAGTCTCTACAGAACAAGGTCAAGAGCTAAGAAAGGAGATAGGAGCATTAGCATATATAGAATGTAG
CTCCAAAACACAACAGAACGTGAAGGCGGTGTTTGATGCAGCGATAAAAGTAGTTTTACAGCCTCCTTCAAAAACCAAGAAACAAA
AGAGAAGATTTGGTTTCTGCCATGCTCTCTGATCTCAAGCTTCTCTTGCTTGCTTTAAAATTATGTATATGTTTATAGTGTGTTGC
TATCTTCTTAAGTGTGATTTTGTTTTCTTCTTTATGAGGTGTGTTGTAATAACAAGCCAAGTCTCGTATATGTAAAAAAAATATGT
ACATTAAACCAATCTTCAAAAAATGCTAATGCGTAAAATTAGATGCTACTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566024 Rac-like GTP-binding protein ARAC9 [Arabidopsis thaliana] | 936 | 7e-099 |
| XP_002326847 predicted protein [Populus trichocarpa] | 898 | 2e-094 |
| XP_002526481 rac gtpase, putative [Ricinus communis] | 898 | 2e-094 |
| XP_002269907 PREDICTED: hypothetical protein [Vitis vinifera] | 898 | 2e-094 |
| ABE11611 Rac-like GTP-binding protein [Solanum chacoense] | 838 | 2e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XGU0 Rac-like GTP-binding protein ARAC9 | 936 | 3e-100 |
| Q6EP31 Rac-like GTP-binding protein 5 | 829 | 8e-088 |
| O04369 Rac-like GTP-binding protein RAC1 | 827 | 1e-087 |
| Q38912 Rac-like GTP-binding protein ARAC3 | 824 | 3e-087 |
| Q38919 Rac-like GTP-binding protein ARAC4 | 823 | 4e-087 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1ECR0 At2g44690 | 936 | 5e-099 |
| B9MV47 Predicted protein (Fragment) | 898 | 1e-094 |
| B9SKF1 Rac gtpase, putative | 898 | 1e-094 |
| Q1PCH8 Rac-like GTP-binding protein | 838 | 1e-087 |
| Q9ZRD2 NTGP3 | 836 | 2e-087 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44690.1 ARAC9; GTP binding | 937 | 2e-101 |
| AT4G35020.1 ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase | 824 | 3e-088 |
| AT1G20090.1 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding | 823 | 4e-088 |
| AT1G75840.1 ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase | 819 | 1e-087 |
| AT3G51300.1 ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding | 814 | 4e-087 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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