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Information for unigene UN17362
| FASTA Sequence |
| Unigene ID: UN17362 | Length: 967 |
SSR | SNP | GACGACACATTCGATGGAGGAAGCTGATATCTTAAGTGATCGGATAGGGATAATGGCCAAGGGCAGGCTCCGCTGCGTTGGAACCT
CTATCAGGTTGAAGTCCCGCTTTGGCACAGGTTTCATCGCTAACATTAGCTTCAACGAAAGCAACAACAACGGAGAGAACAACGGC
AACGGTGAAGCTGATTCACGCGAGCCAGTGAAGAAATTCTTCAAAGATCATCTCAATGTGAAACCGATAGAAGAAACCAAAGCCTT
CATGACTTTTGTTATACCGCACGACAAAGAGAATCTTTTGACAAGGTTTTTCGCTGAGCTGCAAGACAGAGAAGTTGAGTTTGGAA
TCTCAGACATCCAACTTGGTCTAGCAACTCTTGAAGAAGTCTTCTTGAACATAGCAAGAAAAGCTGAACTCGAAAGCGCTGCCGTT
GATGGTACAATGGTCACTCTCGAACTAACTTCTGGCTCATCCGTCGAGATACCGGTGGGGGCAAGATTTGTTGGGATACCAGGAAC
TGAAACTGCAGAGAATCCGCGTGGAGTCATGGTGGAAGTGTACTGGCAACAAGACGAGTCGGGATCGTTGTGCATCTCGGGACATT
CCACGGAGATGCCGGTTCCTGATATTGTTCCCGCGACAGATCCGGTTGCACCAGGGCATGGGGGAGTAAGCTTGTTGGGACGGAGA
GGACGGGGACAGCAAGTTCAGGGGATTGTGATTGATCCTGAGTTTGTCGGCTCCCGTCGTGTTAGTAGAAGCGGTTCCTTTGCTTC
CCAACGTTCTTCACTTTGAAAATGAGAATCTAACACACACACACACACCTACAGTTTCTTAACTTACCGGACTCGGCTATGTTATA
TTCTCACGCGGGGTTTGTTTATTTGAATTGTGTGTTCGTGATTAATGATGTAAATTAGACGGGTGTTTGTGATTTTAAAAACTAAT
GTTTATACTGTCATTATGTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190357 ABC transporter A family member 2 [Arabidopsis thaliana] | 1131 | 2e-121 |
| CAB41856 ABC-type transport-like protein [Arabidopsis thaliana] | 1131 | 2e-121 |
| XP_002877573 hypothetical protein ARALYDRAFT_485135 [Arabidopsis lyrata subsp. lyrata] | 1123 | 1e-120 |
| XP_002866449 hypothetical protein ARALYDRAFT_496336 [Arabidopsis lyrata subsp. lyrata] | 871 | 2e-091 |
| Q9FKF2 RecName: Full=ABC transporter A family member 11; Short=ABC transporter ABCA.11; Short=AtABCA11; AltName: Full=Putative ABC2 homolog 15 | 860 | 4e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84K47 ABC transporter A family member 2 | 1131 | 7e-123 |
| Q9FKF2 ABC transporter A family member 11 | 860 | 2e-091 |
| Q9FLT5 ABC transporter A family member 9 | 609 | 2e-062 |
| Q8T6J5 ABC transporter A family member 2 | 198 | 1e-014 |
| Q555Z5 ABC transporter A family member 4 | 191 | 7e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R966 Abc transporter, putative | 827 | 2e-086 |
| B9I300 ABC transporter family, retinal flippase subfamily | 807 | 4e-084 |
| A5C5E7 Putative uncharacterized protein | 780 | 6e-081 |
| B8BAI3 Putative uncharacterized protein | 779 | 7e-081 |
| Q6ZIW1 Os08g0398000 protein | 778 | 1e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G47730.1 ATATH1; ATPase, coupled to transmembrane movement of substances / transporter | 1131 | 7e-124 |
| AT5G61730.1 ATATH11; ATPase, coupled to transmembrane movement of substances / transporter | 820 | 8e-088 |
| AT5G61690.1 ATATH15; ATPase, coupled to transmembrane movement of substances / transporter | 476 | 6e-048 |
| AT3G47790.1 ATATH7; ATPase, coupled to transmembrane movement of substances / transporter | 137 | 1e-008 |
| AT2G41700.1 ATPase, coupled to transmembrane movement of substances / amino acid transmembrane transporter | 132 | 5e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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