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Information for unigene UN17371

FASTA Sequence
Unigene ID: UN17371Length: 939  SNP
GGATCTCATATACCAAAAAAAACAGAAGATTCAACAAGAAGAAAAAATGTTGGCTATTTTTCAAAAGACGTTTGCTCATCCACCGG
AAGAGCTAAACAGCCCGGCTTCAAACCTTTCCGGCAAAACCCCAAAACTTCCGGGAGAAACTCTCTCTGACTTCCTTTCAAACCAT
CCAGACTCTGCTTTCTCCATGAGCTTCGGCGACTCCGCTGTCCTCGCTTTCGCCCGCCCAGAAAACTCTAACCGTCCAAGGATGTT
TAGTGGCATCGATGGAATCTACTGTGTGTTTCTTGGAGCGTTGAACAACCTATGCGACTTGAACAAGCAGTACGGTTTATCTGGAA
AATCCTCAAACGAAGCCATGTTTGTGATCGAAGCGTACCGAACACTACGTGACCGTGGCCCTTACCCAGCTGATCAAGTTCTCAGA
GGTCTCGATGGAAGTTTTGCTTTTGTCGTCTACGATACTCAGACCTCCTCTGTTTTCGCCGCTCTTGGATCTGATGGAGCAGAGAG
TTTGTATTGGGGGATAGCTGCAGATGGGTCCGTTGTTATGTCTGATGATATCAAGATTATTAAGCAAGGATGTGCTAAGTCATTTG
CTCCTTTTCCAACAGGGTGTATGTTTCACAGTGAGAGTGGTTTGATGAGTTTTGAGCATCCGAAGAATAAGATGAAGGCGATGCAG
AGGATTGATAGTGAAGGGGTTATATGTGGAGCTAACTTTAAAGTTGATACTTACTCCAAGATCAATAGCATTCCGAGGAGGGGAAG
TGAAGCTAATTGGTCTTTAGCAAACTCTAGTTAATGAAAGGACGAAGAAGAAGAGTTACTTTTGTTCTTTGATGTGATTTCTGTAA
AATAATAAACGTACTAATAAAATGGTTTTTTCCTGATTCAATTTGGTGGAGTGATAATAAAATGGTTTTTTCCTGACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894413 predicted protein [Arabidopsis lyrata subsp. lyrata]12011e-129
NP_566513 aluminum induced protein with YGL and LRDR motif [Arabidopsis thaliana]11275e-121
XP_002882944 hypothetical protein ARALYDRAFT_478991 [Arabidopsis lyrata subsp. lyrata]11203e-120
NP_567775 aluminum induced protein with YGL and LRDR motifs [Arabidopsis thaliana]9851e-104
ACU21420 unknown [Glycine max]9743e-103

Swiss-Prot top hits (Blast detail)Scoree value
P24805 Stem-specific protein TSJT13011e-026
Q54MB4 Probable asparagine synthetase [glutamine-hydrolyzing]1397e-008
Q43011 Asparagine synthetase [glutamine-hydrolyzing]1262e-006
P49094 Asparagine synthetase [glutamine-hydrolyzing]1235e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LE80 AT3g15450/MJK13_1111273e-121
Q93V62 AT4g27450/F27G19_509859e-105
C6THW8 Putative uncharacterized protein9742e-103
C6TLE0 Putative uncharacterized protein9689e-103
D6BRF0 Stem-specific protein tsjt1, putative9553e-101

Arabidopsis top hits (Blast detail)Scoree value
AT3G15450.1 unknown protein11272e-123
AT4G27450.1 unknown protein9855e-107
AT3G15450.2 unknown protein8574e-092
AT3G15450.3 unknown protein7509e-080
AT5G43830.1 unknown protein5894e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  6%
 
86  33%
 
610  56%
 
111  6%

Unigene MembersMember information