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Information for unigene UN17376
| FASTA Sequence |
| Unigene ID: UN17376 | Length: 1192 |
SSR | | AACTTGGACTTTTTATTTTGATGGTTCTTACACACGAAGTAATAAACCGATCCCGAAAACCGGCAAGAATCAACTGTTAACATGTG
AAAAAAGGCAAACCATGGGAGAACACAAACGGAGTGCAACACACACACACAAACACAATAAGCAGAAAACAAACAACAACCTTGAG
ACATGTTTCAGATGGAGACACTGTTCGGGATTCCCCTGCCAGTGACTCCCGCTACACTGGTCGGAAACAAAGAAGTGTATGGCATC
TTAACTGGCCCAGTCCTGTTCTTGAGATTCTCGTCTTCGTTCCTTTCATCAATCTTCTTCTCAATCTCTTTTACTTTCTCTCCAAA
CTTCTCAAACGCTTCCAACGCCTCTTTCTCAGCTGCCCATTCCTTAGAATCTCTCTGCCCCAAATACACCTCGTCGCTCGAATGAG
TAGACAGAATCTCAATCAGAGATATCCCAAGAAGCGTCTGAAGCTGAGCCGTGATCGTCTTCAAAAACACTTTCTCCGGATTCTTC
TCAAGCTCTTCAAACTCCGGAGTGTTTTCCTTTGGCATGAACTGTCGGCTTATGGTCGGCCTGTTGGGGAGATACCCAGCAAAGGG
ATACTGTCCGAAGTTAACAGCTGCATGAAGAGCAGAAGCCACCCATATTATTATAGTGCAAGAGTCAATCAGTTCTTTGCGGGTTT
GCATTTTGGACCACCAAGGTTCTGACTTTTTGTCTCCGTGACCTTCCTCACGCACCTCCTTCCACCAAGCTTGGAGCTCCGTGTCG
TTTTGGACATCCTCGTCCGTCTTGTAATACAAGGGAATGTAGTCTTGGACCCATGACTCGATAGCGTACCAAACCTCAAGCCCATC
CACAGCGTAAGGATAGTCTTCTATCTTCAGATGTAATCCGTGTGGTGCTTCTGGATCCTCAACAGCCATCCCTCTCTTTTTAAGTT
ATGCTGGTAAGGCTTGGTCAGGGAAGGTCCAGTGGTTCTTGTAGATGAAAGATGACATCTCCATGGCATATTTAGAAGGGAAGACT
GTGATCTCAAAGATACCCCTCCATTGATCAAGATTTGCCTAGCAAGCGCATTAATGTTCATCGTATCACGGTAGTGAGGTTCGAGG
AGCTTGAAAACCGGGTGAAGAACGCTTAGCTGTCTGTTCGTGGCAATGACAAAAGGTTCAATCGATGCGTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAO03558 lipoxygenase 1 [Brassica napus] | 1475 | 3e-161 |
| XP_002891934 hypothetical protein ARALYDRAFT_474776 [Arabidopsis lyrata subsp. lyrata] | 1414 | 3e-154 |
| NP_175900 lipoxygenase 1 [Arabidopsis thaliana] | 1408 | 2e-153 |
| AAK50778 bacterial-induced lipoxygenase [Gossypium hirsutum] | 1163 | 4e-125 |
| CAD10740 lipoxygenase [Corylus avellana] | 1162 | 6e-125 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q06327 Lipoxygenase 1 | 1408 | 7e-155 |
| P38415 Lipoxygenase A | 1125 | 5e-122 |
| P37831 Lipoxygenase 1 | 1115 | 7e-121 |
| P09918 Seed lipoxygenase-3 | 1021 | 6e-110 |
| Q9LUW0 Lipoxygenase 5, chloroplastic | 1020 | 7e-110 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G55020.1 LOX1; lipoxygenase | 1409 | 5e-156 |
| AT3G22400.1 LOX5; electron carrier/ iron ion binding / lipoxygenase/ metal ion binding / oxidoreductase, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1021 | 5e-111 |
| AT1G67560.1 lipoxygenase family protein | 770 | 6e-082 |
| AT1G72520.1 lipoxygenase, putative | 741 | 1e-078 |
| AT3G45140.1 LOX2 (LIPOXYGENASE 2); lipoxygenase | 738 | 3e-078 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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