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Information for unigene UN17383
| FASTA Sequence |
| Unigene ID: UN17383 | Length: 835 |
SSR | | GGGGGTGAACAAAGGGGAAAAAAAATGGAGGTAGCAGCAGCGACTGCGACGAGCTTCACAACGCTCCGAGCTCGTACGTCAGCGAT
AATCCCGTCTTCGAAGCGTAATCTGAGATCTAAAGTGAGATGTTCGTCGTCTTCTTCTTCTTCTCTCAGAGCTTCTCTCTCGAACG
GCTTACTCTCGTCGTACATCGGAGGAAGCATCTCTAGTGACTTCTGCGGCGCCAAGCTTCGTTCCGAATCGCTTAATCCGTTGAAT
ATCTCCAGCTCGAAGCCTAAGCGCGGAGTTGTCACTATGGTTATACCGTTTTCAAAAGGGAGTGCACACGAACAGCCTCCTCCTGA
TTTGGCATCGTATTTGTTCAAAAACAGAATTGTATATTTGGGAATGTCTCTTGTGCCTTCAGTCACTGAGTTGATACTCGCCGAGT
TTCTTTACCTTCAGTATGAAGACGAGGACAAGCCTATTTACCTCTACATTAACTCCACGGGGACGACCAAGAATGGTGAGAAGTTG
GGCTATGATACCGAGGCTTTTGCAATTTATGATGTCATGGGGTATGTCAAACCACCAATCTTTACTCTTTGCGTTGGGAATGCTTG
GGGTGAAGCTGCTTTGCTTCTGACTGCTGGTGCGAAAGGAAACCGTTCTGCATTGCCCTCATCAACTATAATGATAAAACAGCCCA
TTGCTCGATTTCAAGCCAAGCAACCGATGTTGAAATCGCAAGGAAAGAAATCAATCACATAAAGACAGAAATGGTCAAGCTGTATT
CAAAGCATATTGGTAATCCCCGGGAGTAGATTGAAGCTGACATGAAACGCCCAAATATTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868088 hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp. lyrata] | 1058 | 4e-113 |
| NP_567521 ATP-dependent Clp protease proteolytic subunit-related protein 4 [Arabidopsis thaliana] | 1048 | 5e-112 |
| AAL91164 unknown protein [Arabidopsis thaliana] | 1045 | 1e-111 |
| CAB10484 Clp proteinase like protein [Arabidopsis thaliana] | 1018 | 2e-108 |
| XP_002329556 predicted protein [Populus trichocarpa] | 827 | 2e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic | 1048 | 2e-113 |
| Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic | 343 | 1e-031 |
| Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like | 302 | 8e-027 |
| P74466 Putative ATP-dependent Clp protease proteolytic subunit-like | 301 | 1e-026 |
| Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic | 296 | 4e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PAS6 ATP-dependent Clp protease proteolytic subunit | 827 | 2e-086 |
| B9SZ03 ATP-dependent Clp protease proteolytic subunit | 790 | 3e-082 |
| D0EX73 ATP-dependent Clp protease proteolytic subunit | 787 | 7e-082 |
| C6T8Y5 ATP-dependent Clp protease proteolytic subunit | 782 | 3e-081 |
| B7FFG4 ATP-dependent Clp protease proteolytic subunit (Fragment) | 699 | 1e-071 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17040.1 ATP-dependent Clp protease proteolytic subunit, putative | 1058 | 2e-115 |
| AT1G09130.1 ATP-dependent Clp protease proteolytic subunit, putative | 343 | 1e-032 |
| AT1G09130.2 ATP-dependent Clp protease proteolytic subunit, putative | 343 | 1e-032 |
| AT1G49970.1 CLPR1; serine-type endopeptidase | 296 | 4e-027 |
| AT5G23140.1 NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase | 243 | 5e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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