Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17385

FASTA Sequence
Unigene ID: UN17385Length: 981 SSRSNP
ATGTTGTGTCTTTCAAACTGTGTGTCTGCACGTATTGTATATATATTTAAAAACAAACATCCTTCAAGAATTGTAGTACATTTTCT
TGAGCCACTTTGGATAAACAATGAAGAAAAGATGAAAAATAAATTATCAACCACACAAATGTAAACAAGTTCTGTAGTGAAGATCC
TTTGTTTCTTTTTTTTTCACGTCTATGCCAGTAAGGGAACTTTCTCAGCTGTTCCATGGAGCATCACAACCCAGTGCTATTTTATC
ATGAAGGATTAAAATCTCTCTATATGATCCAATTTACTTGCAGCTACAAAATGGTGCATGCGCATCGATTCTTCATGGGAGGATCA
TTCTGCAGTTTTTCGCTCTTTTTGTCTAAAGTAGGAGGGCGAAGAACAACATGCATAGTGATGACCATTCCTGGAAGTTCGCCAAC
GGGAAGCCTGGATTCAGCAAGTGTCCTATTGTTGTCTAGTATCTTCCCGGCATTGATGAGCTTCACATCATTTACAGTCTTTGGAA
TGTTTTCTGAGTCTTTAGGCCATTGAGAGATGATCTTCTCTTTGAGAGAAGAAACAGTCATAGATTGATTGTACTTGGTGGGACCT
ATGTCAGTGCCATCTGCGAGTCTAAACTTGAGTTCTATCCAATCTTCACCTGCCATCTCTCTCTCTCTATTCCCACAAAACAACAC
ACAAAAAAGAATCAAAAGTCTTCGCCTTTTCTCTCTCTGGGGAATATCATCGAACACAAGATAGGCCCTTTTTCACCAAATTCAAC
CCAAATCAAGTTTCGTAGAGAACTTCGAAACCCAGTTGCTGAAGGAGGATTCACTGCAGAAAGAAACAGACTTTATCCTCTTTGGG
ACGGTTTATGAAGAGGAGGAAGAAGGACAGATCCAATTATAATTGAAGGGTTTTTCGATTTAAGAAAAAAACGAAAGAGAAAGAAG
ATGAAGAGAGACGCTTTGGGGTTGAAAGGCTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173624 membrane-anchored ubiquitin-fold protein 6 [Arabidopsis thaliana]5576e-055
XP_002890488 ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]5532e-054
XP_002285815 PREDICTED: hypothetical protein [Vitis vinifera]4681e-044
AAF86549 F2E2.12 [Arabidopsis thaliana]4601e-043
XP_002513864 conserved hypothetical protein [Ricinus communis]4545e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q8GWJ6 Membrane-anchored ubiquitin-fold protein 65573e-056
Q9SH14 Membrane-anchored ubiquitin-fold protein 54571e-044
Q6Z8K4 Membrane-anchored ubiquitin-fold protein 34193e-040
Q75GT2 Membrane-anchored ubiquitin-fold protein 13387e-031
Q9LSD8 Membrane-anchored ubiquitin-fold protein 43234e-029

TrEMBL top hits (Blast detail)Scoree value
B9RJE5 Putative uncharacterized protein4544e-043
Q9ZRD0 NTGP54231e-039
A6N1C4 Putative uncharacterized protein4194e-039
Q0DXJ1 Os02g0750600 protein4194e-039
B6TMU4 NTGP54071e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G22050.1 MUB6 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR)5582e-057
AT1G77870.1 MUB5 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 5 PRECURSOR)4587e-046
AT3G26980.1 MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)3243e-030
AT3G01050.1 MUB1 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR)3054e-028
AT4G24990.1 ATGP43037e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  20%
 
122  20%
 
94  40%
 
72  20%

Unigene MembersMember information