Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17390

FASTA Sequence
Unigene ID: UN17390Length: 1471  SNP
AGTCACTAACTAGTTTAAAATATTAACCACCACTTCATATAGTGTATGTTTCGTTTTACAACAAAGCAAAGTCAAACCTGACATGG
ATATTAGTATTTGACACCAAGTCTTTGTTGATTTAATACGTATTAAGTTTTAAATATGGGAAAGTGGGCAATGGGGTAAGTGACTT
GGAAAAAGATAAAAGGAACATAGAACGTTGAAGTTGTCAAACCAGAAAGGGTTTAAGTCGGGGATCAGTACGGTGAGGAAGACCAG
TGCGAGCTCCCAAAGCTCGGCAGTTGCAAGCAGCCACTTGAGTAGCGAACGGTAGCATCTTCTCTGGGGACATGCCGGCGCATAAA
GCATAAAGAACTGCTCCTATGAATGCGTCGCCTGCACCGGTGGTGTCAACAAGCTCTTCTGGAGGAATTTTCTCTGCTGTTCCGAG
AAACAATCTTCCGCTCAGTGTTCCTATCTCGTTGGCCTTTAGCTTAGCTTTCTCCGATGAAACGCATGTTGGAAATGCTGCGGTCG
AGTCTGATCTTTGCTTCAGAGACTCCACCAAACTGTCAATGTCTGTCTCTTTGGATTCTGATGTTTCTGTTGAATCTCTCTGGATC
ATTAAGCATCCTTCTTCACCTAAGGTTACGATCACAAACTTCAGCTTCGGCAATCTCAACATCATGGACACAAGCGCACATGGAAT
TGAAGACGCTTCTGTCCATGCCTGAGGGAATTTTGCTGTGCAGACAACGTAATCGGCGAGTTGCAAGAGATCGTCTAATCCATCTC
TTTTCTTCTCTGCATCAACTAAAATAGGTATCTTCTTCCGACTTGCCTCTTTTGCAATCACCAATGCGGTTTCGTGTAATCTTACA
TCAAAGTATGCAATGCTTGCTCTGTCTAGAGCAGATAACATGGTCGAGTGAGGAAGATCAGTTGGTACCATGGGTGGATATCCAGG
TGTATGAATACAAGTACGCGTTTTCGTTTGTTTATCAACAATGACGTAGGTAAATGGAGTATTGCCCTCTTTAGAGACCACAAGAA
AAGAGGTATCGACACCATCGGATTCAAGCTCCTCCAATATACCCTTCCCTTGAGAGTCATTTGCTACCTTACTAATAAGCCTAGAA
GTCAATCCCAGACGAGCTGCACAAGTTAAAGCGTTTCCAGCATTCCCCCCTCCTTGTACCTTGAGGCTAGTGCTTCGGATCTTGTC
ATCAGGTTTAGGATAAGAATCCACCGTCGCCAGGAAATCCACAGTGGTTCCGCCGCAACCAAGGACAATGCCGTCATCCGTCGGAG
GAGGAGGAGCAGAATCGATTGACGACGAAGAAGACATTCTCGTCCTGAAACTCGTGAACTGACGACGGGAGGACGGGAGATAGACG
CCGGAGAAGAGAGGAAGAGGTGTGAGATGAGTGAAACACATCATCATTTTTTTTTCTTTGTATCTAATCTGTGAGAGAGAGATTGA
GTGAGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974632 pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]17112e-188
NP_849466 pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]17003e-187
XP_002869481 pfkB-type carbohydrate kinase family protein [Arabidopsis lyrata subsp. lyrata]17003e-187
NP_001190863 pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]16969e-187
NP_567816 pfkB-like carbohydrate kinase family protein [Arabidopsis thaliana]16815e-185

Swiss-Prot top hits (Blast detail)Scoree value
P50053 Ketohexokinase1605e-010
P32143 Uncharacterized sugar kinase yihV1552e-009
O27587 Uncharacterized sugar kinase MTH_15441524e-009
Q9H477 Ribokinase1491e-008
Q02974 Ketohexokinase1418e-008

TrEMBL top hits (Blast detail)Scoree value
Q3E9U8 Putative uncharacterized protein At4g28706.317111e-188
Q8VZA8 Putative uncharacterized protein17002e-187
Q944J2 At4g2922716814e-185
B9T5V5 Kinase, putative14242e-155
B9GRA9 Predicted protein (Fragment)13633e-148

Arabidopsis top hits (Blast detail)Scoree value
AT4G28706.3 pfkB-type carbohydrate kinase family protein17125e-191
AT4G28706.2 pfkB-type carbohydrate kinase family protein17019e-190
AT4G28706.1 pfkB-type carbohydrate kinase family protein16848e-188
AT5G43910.2 pfkB-type carbohydrate kinase family protein10852e-118
AT5G43910.3 pfkB-type carbohydrate kinase family protein8173e-087

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  18%
 
64  36%
 
92  18%
 
73  27%

Unigene MembersMember information