 |
Information for unigene UN17392
| FASTA Sequence |
| Unigene ID: UN17392 | Length: 1753 |
| SNP | GGTGCGTCAGAATCAGAAGCATCGAGAGGGTGTAATCTAAATCAAATCGTAGATCTTCGAATATGGGTGGTGCGGTGAAGGATATA
GCTTCAAAGTTGGAGCTTGATAACTTGCGGCAGAGCGGCGCACCGGTGGTGCTTCACTTCTGGGCTTCGTGGTGTGATGCTTCCAA
GCAGATGGATCAAGTCTTCTCTCACCTCGCTACCGACTTCCCTCGCGCTCACTTCTTTAGGGTAGAAGCTGAGGGACATCCTGAGA
TATCTGAAGCTTACTCTGTTTCTGCTGTTCCCTATTTCGTCTTCTTCAAGGATGGCAAAGTTGTGGATACACTTGAGGGAGCAGAT
CCATCAAGTTTAGCCAACAAGGTTGGCAAAGTCGCTGGTTCTAGCACTTCTGCTGAGCCTGCTGCTCCTGCAAGCCTAGGGTTGGC
TGCAGGGCCAACGATTCTCGAAACCGTCAAGGAGAACGCGAAAGCTACTGCGAAAGACAGAGCTCAGCCTTTATCCTCCACCACCG
CGGAAGCTCTCAATACCCGTTTGGAGAAACTCACCAAATCTCACCCTGTCATGTTGTTCATGAAAGGTACTCCTGAGGAGCCTAGG
TGCGGTTTTAGCAAGAACGTGGTCAACATCTTGAGAGAGGAGAAGGTTGAGTTCGGGAGTTTCGATATACTTTCGGACAATGAAGT
CCGTGAAGGTCTGAATTTCTCTAACTGGCCAACGTACCCTCAGCTCTACTGTAACGGAGAGCTACTCGGTGGAGCTGATATTGTGA
TAGCGATGCACGAGAGCGGTGAGCTCAAAGAAGCTTTGATAGAAGAAGCTGGGAAAGGAGGAGGGGTGAGTTCAGGCAACACAGGA
GGGTTAAGCGAGACACTCCAAGCTCGTCTCGAAGGGCTTGTGAATTCAAGCCCAGTGATGCTGTTCATGAAAGGAAAACCAGAAGA
GCCCAAGTGTGGGTTCAGTGGGAAAGTGGTTGAGATTCTCAAACAAGAGAAGATCGAGTTTGGAAGTTTTGATATACTCTTGGATG
ATGAAGTTCGTCAAGGGCTTAAAGTGTACTCAAACTGGTCTAGCTACCCTCAGCTTTACGTCAAAGGCGAGCTTCTAGGTGGATCA
GACATTGTCTTGGAGATGCAGAAGAGCGGCGAGCTGAAACAAGTCTTGTCTGAGAAAGGGATCGTTGGAAAACAGAGTCTTGAAGA
GAGATTAAAGTCATTGATTAACTCTGAGAAGGTTATGCTTTTCATGAAAGGCTCACCAGATGAACCAAAGTGCGGGTTTAGCTCCA
AAGTTGTGAAGGCACTGAGAGGAGAAGATGTGAGTTTCGGGTCGTTTGATATATTGAGTGATGAAGAGGTGAGACAAGGGATCAAG
AGTTTCTCGAACTGGCCCACGTTTCCTCAGCTTTACTATAAAGGTGAGTTGGTTGGAGGATGTGATATCATTATGGAGCTAAGTAG
CAGTGGTGATCTCAAAGCTACTCTATCTGAGTAAGCAAATAGGTTTTCCCCTCCTTTTTGCCTTGGTGAGAAGATTCTGTTTCTGG
TAATAATATGTTTAGGTGTTGCAAACATTGTTGTTACTTAAGGTTTGTGTGGTTATTTATATGATTGATGAAACATTTTTTCGCAT
GTCTTTTTATTTTATTTTTGTGTTTGGAGTTATTTTCTTTACAATCCTCTCTAAAAGTTTAAATCTGCCAACTTCGTATTATTCCA
TTTACACCAATGAAGTAAGCAATAGTTTCTGCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192404 monothiol glutaredoxin-S17 [Arabidopsis thaliana] | 1129 | 7e-121 |
| XP_002874821 thioredoxin family protein [Arabidopsis lyrata subsp. lyrata] | 1108 | 2e-118 |
| XP_002270415 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] | 942 | 3e-099 |
| XP_002270454 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] | 942 | 3e-099 |
| XP_002519053 glutaredoxin, grx, putative [Ricinus communis] | 936 | 2e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZPH2 Monothiol glutaredoxin-S17 | 1129 | 3e-122 |
| Q0IWL9 Monothiol glutaredoxin-S11 | 836 | 3e-088 |
| Q5XJ54 Glutaredoxin 3 | 653 | 4e-067 |
| Q28ID3 Glutaredoxin-3 | 650 | 1e-066 |
| O76003 Glutaredoxin-3 | 629 | 3e-064 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FIA1 Putative uncharacterized protein | 1737 | 1e-191 |
| B9RZ84 Glutaredoxin, grx, putative | 936 | 1e-098 |
| B9H2W2 Glutaredoxin S17 | 931 | 4e-098 |
| B9N3E6 Glutaredoxin S17 | 923 | 3e-097 |
| A9PES4 Putative uncharacterized protein | 877 | 7e-092 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G04950.1 thioredoxin family protein | 2164 | 2e-243 |
| AT4G32580.1 thioredoxin family protein | 670 | 4e-070 |
| AT3G54900.1 CXIP1 (CAX INTERACTING PROTEIN 1); antiporter/ glutathione disulfide oxidoreductase | 277 | 1e-024 |
| AT3G15660.1 GRX4 (GLUTAREDOXIN 4); metal ion binding | 260 | 1e-022 |
| AT3G15660.2 GRX4 (GLUTAREDOXIN 4); metal ion binding | 260 | 1e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
