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Information for unigene UN17408

FASTA Sequence
Unigene ID: UN17408Length: 1361 SSR 
CGCGCAAACACAGCTCAGAGGCTGTTTTTTTTTTCTCAATTTCTCAAGATGTTATTAATATTACAGACATAAACAGATATTATCAG
AGATTCAATAACAAAAACAAAGCAAGACAAATACAAGCATTTCGATGAGTTTCTGTTCTTTAGAACTCTCCTTACTGAGGATTGAA
CTTGACTGTTTCACGATATATAAGCTCCTTGATGTTCTCTTCTGACAAAGAAGGTTGTTCGAAATCGAAATTGAACGGCCTCACAC
ACACCGGTTCCTCGTTTATATCGTGCAGCGGGGCCAAATACGGGTGGCACAACGCCTCATCAACTGTGATGCGTCTGTAGGATCAA
AGACGAGCATTTTCTCCAGCAAATCTGCTGCTCCAGCTGACATGTTTGGGAACCTAGCGGCAAAGTTCTGTCTCGGGTACTGTGGA
AGCTGTTTAACGTATCTCCTTGCGTTGTCACTCCTTAAGAACCCCAGGCTTGAATCATCGGGTGATCCTATAAGCTCAGTGATAAG
CCTAAGCTGATGAACATAATCTTTACCGGGAAACAAGGGCTCTCTTGTCATTGTTTCACCGAATACAACCGACGGACCAAATATCG
ATGGCTGCGGTGTACTCGGAGCAGTTAAGGAGCAACTCTGGAGCACGGTACCAGCGTGTAACAACGTACTCAGTCATGAAGTCGGT
CTCGGATTTGGTCCTCGCAAGCCCGAAATCCCCAAGCTTTAGATCACAGTTTGCATTGAGGAGCAAATTGCTGGGCTTTAAATCTC
GGTGTAAGACATTGGCTGAGTGAACGTACTTGAGCCCACGCAACAACTGATACAAGAAGAACCGGCAATGATCATCAGTTAAGGGT
TGGTTAGAGCGTATAATCTGGTGGAGATCAGTGTCCATAAGCTCATAAACAATGTAAACATCGTTGAAGTTCTCTCTCAGGGGTGG
TCTTATTATATCCTTAACAGCAATAACGTTCTCGTGATCCATGTGCTTGAGAAGCTTAATCTCTCTCAAAGTCCTTTTGGCGTCGA
TGATGTTGTCAAAAGCGTTACCGATCTTCTTGATAGCCACTTCCTCTCCCGTCTCTGAGTTTGTAGCAGCACAGACGATGCCGTAA
GCGCCTCTGCCGATGGGGCGAAGAGGAGGAACATACTTTCTACTCACTTCGAAGATGTTTCCATAAACATTGTACTGAACGTAGCT
ACCTCCGTGAGTAGCCAATCCTTTCGTGCTCTGATCGCCTGAACCACCTCCTCCGAAACAGTTCTCCGCCGCCATAGCTAAAATCG
AATTGAATCGGACCCAAGACACACGCTCGCTGAAACTGAGGGAGAGAGAGAGAGAGAGGGAGAGGCTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADP24129 mitogen-activaed protein kinase 4 [Brassica napus]14583e-159
ACE80627 MAP kinase 4 [Brassica napus]14512e-158
ABB69023 mitogen-activated protein kinase 4 [Brassica napus]14494e-158
BAJ33841 unnamed protein product [Thellungiella halophila]14243e-155
XP_002874986 mitogen-activated protein kinase 4 [Arabidopsis lyrata subsp. lyrata]14172e-154

Swiss-Prot top hits (Blast detail)Scoree value
Q39024 Mitogen-activated protein kinase 414097e-155
Q9LMM5 Mitogen-activated protein kinase 1112717e-139
Q40353 Mitogen-activated protein kinase homolog MMK212351e-134
Q5J4W4 Mitogen-activated protein kinase 212279e-134
Q336X9 Mitogen-activated protein kinase 612181e-132

TrEMBL top hits (Blast detail)Scoree value
C1IHR2 MAP kinase 414511e-158
Q2XVV7 Mitogen-activated protein kinase 414493e-158
B2BDY3 Mitogen-activated protein kinase 4 (Fragment)13938e-152
B9GQC1 Predicted protein12791e-138
B9RDW5 Big map kinase/bmk, putative12763e-138

Arabidopsis top hits (Blast detail)Scoree value
AT4G01370.1 ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase14096e-156
AT1G01560.2 ATMPK11; MAP kinase/ kinase12716e-140
AT2G46070.1 MPK12 (MITOGEN-ACTIVATED PROTEIN KINASE 12); MAP kinase/ kinase11409e-125
AT4G11330.1 ATMPK5 (MAP KINASE 5); MAP kinase/ kinase11273e-123
AT2G43790.1 ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6); MAP kinase/ kinase10871e-118

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  50%
 
93  50%

Unigene MembersMember information