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Information for unigene UN17409

FASTA Sequence
Unigene ID: UN17409Length: 1069 SSR 
GGCATCGAGGAGAACAGAAGTTACAGAACACACTATTTCTCTTGTGCATTTTCTTGTTCGTTGACCTGATAACAAAAAGGCATCGA
AGATGAATGTTAGGGTTTTGTTTCTGGCTCTCCTTCTCCTTGCATCTCCGCTGCTTCAAGTTGCTAGATGTCAAGTAGATGCCGAG
GATCATTCAAGTATTGTTGACGATGTTGTGGGAGAACACAGCGATGATGGTGCTGAGGAAGATGATCAGGATTTGGATATCAACTT
GACCTCTGCTCCTGGAGTTGAGACTGTCTCTGTTTTTCCCCAAAAACAGTGCCAAATTGGTGCCAGCTGGAGAAGAGACCGAGCTC
CTTGTTGCTCTCAAAAACGATGGCAAATCTAACGTAGGTGTGATGGGGATTAGGGCCAGCGTCCATCTTCCTTATGATCATAAGCT
CTTGGTTCAGAATCTTACCATGATGAGATTCAACAATGCGTCCATCCCAACTTCTGTTCAAGCAACATTCTCTTACATCTTTGCAG
TCAGCCAGTACCTGCAGCCTGGAGCATTTGATCTGGTGGGTTATATCATCTACCACGTGGAGGGAAAGACACACCAGAGTGTCTTC
TACAATGGGACCATTGAGGTTGTTGAATCTGGTGGTCTTCTCAGCGGTGAGTCTGTCTTCCTCATTACACTTGGGATTGCTCTCCT
CCTCCTCCTCGGTCTATGGGCATACAGCCAAGTGCAGCGTCTCACTAAGAAACCAAAAAGTGTCCAAGTGGAAGTAGGATCAGTCT
ACCGACGCATCAATGGACGAGTGGCTCGAGGGACTCATTTGGCCAGACATTGTCTGGGAAATCGAAGAGCAAGAAGAACTAAGAAG
AAAACTTATTTGCTCCTTGCAGTTTTTAGAGACTCGGCTTTTAGCGTTTTGAAAGAGTTTTACAAGTTTTAAAGTTGAGTCTTGAG
GAACTTTAGGGTTTATAAACGTTACTTTCCTCTTTTTTTTTTGTTCATGCATTTGTGTACTTTTTAGACAATCTTATTACCTTCCT
CATCAAACAACTTTTAACTTAATAATGGTTTAGATCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878536 hypothetical protein ARALYDRAFT_480966 [Arabidopsis lyrata subsp. lyrata]7163e-073
NP_565498 translocon-associated protein subunit alpha [Arabidopsis thaliana]7073e-072
AAA21820 alpha-subunit; putative [Arabidopsis thaliana]7073e-072
AAM63845 putative signal sequence receptor, alpha subunit (SSR-alpha) [Arabidopsis thaliana]7073e-072
XP_002529245 translocon-associated protein, alpha subunit, putative [Ricinus communis]5756e-057

Swiss-Prot top hits (Blast detail)Scoree value
P45434 Translocon-associated protein subunit alpha7071e-073

TrEMBL top hits (Blast detail)Scoree value
Q5M727 At2g211607072e-072
Q8LC49 Putative signal sequence receptor, alpha subunit (SSR-alpha)7072e-072
B9STC6 Translocon-associated protein, alpha subunit, putative5754e-057
B9HRA7 Predicted protein5664e-056
A9P9I6 Putative uncharacterized protein5541e-054

Arabidopsis top hits (Blast detail)Scoree value
AT2G21160.1 translocon-associated protein alpha (TRAP alpha) family protein7071e-074
AT2G21160.2 translocon-associated protein alpha (TRAP alpha) family protein5351e-054
AT2G16595.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: translocon-associated protein alpha (TRAP alpha) family protein (TAIR:AT2G21160.1); Has 191 Blast hits to 191 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 121; Fungi - 18; Plants - 38; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).4462e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  25%
 
73  75%

Unigene MembersMember information