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Information for unigene UN17441
| FASTA Sequence |
| Unigene ID: UN17441 | Length: 889 |
SSR | SNP | GGATCCACACCTCTCTCTCCATCTCTCTCTCTCTCTCTCTCTCTGTCTCGCCAGATTTGAATCATCGACCTGATCTCAGATCCAAA
TCACAAGCCTTCGACATGTCTACCTTCAGCGGCGATGAAACAGCTCCTTTCTTCGGCTTCCTCGGCGCTGCAGCCGCACTCGTCTT
CTCCTGTATGGGAGCTGCTTATGGAACAGCAAAGAGTGGAGTTGGTGTGGCTTCTATGGGAGTCATGAGGCCAGAGTTGGTCATGA
AGTCCATTGTCCCCGTTGTCATGGCTGGTGTCTTGGGTATTTACGGTTTGATTATTGCTGTTATCATCAGTACCGGGATTAACCCC
AAGGCTAAGTCTTACTACCTCTTCGATGGATACGCACATCTCTCCTCCGGTCTTGCTTGTGGTCTTGCTGGTCTCTCTGCTGGTAT
GGCCATTGGTATTGTCGGAGATGCCGGTGTCAGGGCAAATGCTCAGCAGCCTAAGCTCTTTGTCGGGATGATTCTTATCCTTATCT
TCGCAGAGGCGCTTGCTCTTTACGGCCTTATTGTGGGAATCATCCTCTCTTCTAGAGCTGGCCAGTCTAGAGCTGAATGAGAATGT
AACCCACCACAAGATTTTCCCCCGAAGGTACTTTTATTTTCTGTGTGTGTTTTGTTGTTCTATCGTTCTTTAGCATATGTATCATC
GGGAACTGAAGAAAAAAATTATTGGACACTTGGGAACTTTGTTTCGGAAGCTCTCCTATTTCTCTCTCTCTCGGTGGTTGATCTCC
GATGTAGGGATTTTTTTTATTATTTGGTTCTGTAATAAAGAGAGCTCTGATGGAGCTTGGTATGTTTTTGTATTCTTGTATTGTCC
TGAGGAAGTTAAATACATTTATTTGTAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179244 V-type proton ATPase proteolipid subunit c1/c3/c5 [Arabidopsis thaliana] | 805 | 9e-084 |
| XP_002313006 predicted protein [Populus trichocarpa] | 805 | 9e-084 |
| XP_002279080 PREDICTED: hypothetical protein [Vitis vinifera] | 802 | 2e-083 |
| XP_002310846 predicted protein [Populus trichocarpa] | 801 | 3e-083 |
| NP_564098 ATPase, F0/V0 complex, subunit C protein [Arabidopsis thaliana] | 800 | 3e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P59227 V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 | 805 | 4e-085 |
| P59228 V-type proton ATPase 16 kDa proteolipid subunit c2 | 800 | 2e-084 |
| Q43434 V-type proton ATPase 16 kDa proteolipid subunit | 800 | 2e-084 |
| Q96473 V-type proton ATPase 16 kDa proteolipid subunit | 797 | 3e-084 |
| Q40585 V-type proton ATPase 16 kDa proteolipid subunit | 796 | 4e-084 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5C5A3 Putative uncharacterized protein | 805 | 6e-084 |
| A9P9J2 Predicted protein | 805 | 6e-084 |
| B9HRF1 Predicted protein | 805 | 6e-084 |
| Q6IDA4 AT4g34720/T4L20_300 | 805 | 6e-084 |
| A5ANS5 Putative uncharacterized protein | 802 | 1e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G16510.1 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) | 806 | 3e-086 |
| AT4G38920.1 ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3); ATPase | 806 | 3e-086 |
| AT4G34720.1 AVA-P1; ATPase/ proton-transporting ATPase, rotational mechanism | 806 | 3e-086 |
| AT1G19910.1 AVA-P2; ATPase/ proton-transporting ATPase, rotational mechanism | 801 | 1e-085 |
| AT1G75630.1 AVA-P4; ATPase | 794 | 7e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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