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Information for unigene UN17449
| FASTA Sequence |
| Unigene ID: UN17449 | Length: 800 |
SSR | | GGAGGTTCTCAAGCAGCTTGCTCTCTCTCTCACACCTAACTTACTAAAGCAGCTAGCTACAATGGCGGTGACCTTTTCAGATCTAC
ACACAGAGCAGGGTCTCAAATCCGTGGAGGAGCACCTCGTCGGAAAAACCTACATCTCCGGAGATAAATTGTCTGTAGATGATGTG
AAGGTATACGCTGCCGTTGTTGAGAAACCAAGCGAGAGTTTCCCTAATGCTAGCAAGTGGTACGCCTGTGTTACCTCCCACCTTGC
TAAAAGTTTCCCTGGTAAAGCCGTAGGAGTTTCAATCGGTGGCTCTGCTGCTGCTCCTGCCCAAGCTGAGGCACCTGCAGTAGCTG
ATGATGATGATGACATGGATCTGTTTGGTGACGAGACCGAGGAGGAAAAGAAAGCTGCAGAGGAGAGGGAGGCTGCTAAGAAGGAC
ACCAAGAAGCCCAAAGAGAGTGGAAAGTCATCTGTGCTCATGGAAGTGAAACCATGGGATGACGAGACAGATATGAAGAAACTTGA
GGAGTGTGTTCGTGCTGTTGAGATGCCTGGTCTTCTATGGGGAGCTTCAAAACTGGTTCCAGTTGGTTACGGGATCAAGAAGCTCA
CGATCATGCTCACAATCGTTGATGACCTCGTCTCCCCAGACAACCTCATTGAAGACTATCTCACCTCTGAACCTAACAACGAGTAC
ATCCAGAGTGTTGACATTGTCGCATTCACAGATCTAGAGACGCTCTAAACTGTCTCCTACAAACGATACATTTCATTTCTCGAGTC
TGTCTGCTGAGATGTTGTTTCTAGTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 1004 | 6e-107 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 971 | 4e-103 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 924 | 1e-097 |
| XP_002266279 PREDICTED: hypothetical protein [Vitis vinifera] | 849 | 6e-089 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 845 | 2e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX3 Elongation factor 1-beta 2 | 971 | 2e-104 |
| Q84WM9 Elongation factor 1-beta 1 | 924 | 5e-099 |
| P29545 Elongation factor 1-beta | 781 | 2e-082 |
| P29546 Elongation factor 1-beta | 715 | 9e-075 |
| P93447 Elongation factor 1-delta | 665 | 6e-069 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 924 | 8e-098 |
| A9P7W8 Predicted protein | 834 | 2e-087 |
| B9GEM9 Predicted protein | 809 | 2e-084 |
| B6SIK8 Elongation factor 1-beta | 777 | 9e-081 |
| B6SLK4 Elongation factor 1-beta | 775 | 2e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 971 | 2e-105 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 924 | 5e-100 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 496 | 2e-050 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 491 | 8e-050 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 491 | 8e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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