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Information for unigene UN17454

FASTA Sequence
Unigene ID: UN17454Length: 1009 SSR 
AGAAACAAATCTGCCATTACTTTTATCGAATTCGACTCAAGAGACAACTTAAGTCCTAAAACACAATTAGATAGAGTTTCAAATCA
CAGGACGAGATTTCTGAGTATTTTTAAAATTCCAACTCTACTTGGCTCTTGCCTTCTTATTAGAGAGACTGCTAACAATGAAATCA
TCATCATCATCATCATCAGAATCCTTCTTCCGCTTCTTCGTGGTTGGTTTCGAATCATTTCCTTTCTTTTTGCCTGACAAAGCTTC
AGACGACGGTTTTTTTACTTCCTTCTTCTCGGCCACTAGTGATTTGGAGCCGGTTCTTGGGGCACTTCTTGGGGTGGAAGGTGCAG
ATTTTGTAGGAGAGCTGAGCTTTCCAGTCTTTTGCAACTTCTTCTCAAGAACTTTCTTTGCCTCTGCAGCTGGAAGCAACCCTGAC
TCCATCATCCAAATCTTAGCCATTTCGCTAGTTGGAACTTGCTTGTGAAGTGACTCATAGAAAATCCTAAGTGGATCTCTCTCCTC
AGGTTGGTCTCTCTTCTGACCAGGCAAATCATAAACTTTCTTCTCCTTCTTCTTCTTCACATCTCCTTCTTCTTTTTTCTTCTTCT
TTGCCTCTTCTTCTTCTTCTTTCTCTTTCTCAATCTTCTTTTTCTTCAACTCTTTCTCCTTTGAGACGCCGCCAGCAGATGAATCC
TTCCTCTTGGAAAGAGGTTTGTCATCGTCCTCTTCTTCGTCAATCTCCTTCTTCTTAACTGGCTTTGGGCGAGACCCAGATAACTT
GATGGGTTTGTTATCATCATCATCATTGTTGTCCTTGTTCAATTTCCTCGAAGCTGACGAACCAGCATTGTTGGCGTTTGTAGACG
GCTTCTTCTTAACCAACGAACCCAAGCTCTTGTTGTCTTCGTCAGCCTCCTCTTTCTTCACATCTTTAGCATCATCCGATGTCATC
CTTCCTTCTTCTTCCACCTACCAACAAGCTTCGGGGGAGATTTCAGACGGAAACCGCTGTCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF79914 Contains a weak similarity to Rap8 (Rac-3-1) gene from Rhynchosciara americana gb|U69899 [Arabidopsis thaliana]6463e-065
NP_173428 uncharacterized protein [Arabidopsis thaliana]6445e-065
XP_002890362 hypothetical protein ARALYDRAFT_312926 [Arabidopsis lyrata subsp. lyrata]6348e-064
XP_002510538 conserved hypothetical protein [Ricinus communis]5244e-051
XP_002306929 predicted protein [Populus trichocarpa]4832e-046

Swiss-Prot top hits (Blast detail)Scoree value
Q5XXA7 Hepatoma-derived growth factor-related protein 21666e-011
A5E4P1 Protein PXR11658e-011
Q55FI4 Nucleolar protein 581585e-010
Q6BUE3 Protein PXR11569e-010
Q6C1L3 Protein PXR11551e-009

TrEMBL top hits (Blast detail)Scoree value
Q9LNS7 T20H2.23 protein6597e-067
B9R895 Putative uncharacterized protein5243e-051
B9H4X9 Predicted protein4832e-046
A9P7U6 Putative uncharacterized protein4786e-046
Q10P22 Os03g0249900 protein4454e-042

Arabidopsis top hits (Blast detail)Scoree value
AT1G19990.1 unknown protein6585e-069
AT5G11600.1 unknown protein2535e-022
AT3G28770.1 unknown protein1909e-015
AT1G56660.1 unknown protein1853e-014
AT5G27120.1 SAR DNA-binding protein, putative1291e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  57%
 
62  29%
 
81  14%

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