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Information for unigene UN17457
FASTA Sequence |
Unigene ID: UN17457 | Length: 1075 |
| SNP | GGCAAAACAAAAAACAAAAAAAAACGTAAAATTGATTATCAACCGTTAGATTATTCATATTGCCATCAACGCCAACCAATCGCTAC
ACAGATCATCTGCCTTCTCTCTTTATTTTGCTGCTTCTCGCTCATCTCCCTCTCTGTATCTCTCCGGCTAGCCGTTCTCTTAGGTG
GTGTAACGGTAACAATCAAGCTTTAGCAGCCGTTGAATTATCGCGGTTTCCATCTGTAAATGGGCTGCTTCCACTCAAAGGTAGCT
AGAGAATTCCGAGGACACGAAGACCCTGTAAAGCTTGCCTCCGAGACTGCCTTTAGTGTGAGTGAGGTTGAAGCATTGTTTGAGCT
GTTCAAGAGCATAAGCAGTTCCGTTGTTGATGATGGTTTGATAAACAAGGAGGAGTTCCAACTTGCCTTGTTTAAGAGCAGGAAAA
GGGAGAATATATTTGCCAACAGGATATTTGATATGTTTGATGTTAAACGAAAAGGAGTAATTGATTTTGGAGACTTTGTAAGATCA
CTCAATGTGTTCCACCCCAATGCTTCTCTAGAGGACAAAATTGATTTTACGTTTAGGCTTTATGACATGGACTGCACGGGTTTCAT
TGAACGTCAGGAGGTTAAGCAAATGTTGATCGCCCTTCTCTGTGAATCTGAAATGAAGTTGGCTGATGAAACCATAGAGATAATAT
TAGATAAGACATTTGAGGATGCAGACGTGAATCAGGATGGAAAGATTGATAAATTAGAGTGGAGAGATTTCGTGAACAAAAATCCA
TCACTGCTTAAGATCATGACACTCCCATATCTCAGGGATATTACAACAACGTTTCCGAGCTTTGTCTTTAATTCTGAGGTCGATGA
GATTGCCACATGAAGAAACTGGTTTCACAAAGTTTGAAGAAAAGAAGAAGAAAGAACAAGACCAGTTCTGAGTTGATCAGCATCTG
TTTGCAAATACTGTAGAGCTAGAGCATATCTTTTTTTTTTTAATTGTTTAATTTTCTGGGTTCCTATTTAATTCTCAGAACAGTTT
TGAAATCTTGAGTTTTTTAGCTTAAAAAGTGTATCATCAATCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002870095 hypothetical protein ARALYDRAFT_914947 [Arabidopsis lyrata subsp. lyrata] | 1075 | 6e-115 |
NP_567533 calcineurin B-like protein 1 [Arabidopsis thaliana] | 1067 | 5e-114 |
ABD65178 calcineurin B-like protein, putative [Brassica oleracea] | 1058 | 6e-113 |
ABW21691 calcium sensor protein [Eutrema halophilum] | 999 | 4e-106 |
XP_002863361 hypothetical protein ARALYDRAFT_916692 [Arabidopsis lyrata subsp. lyrata] | 999 | 4e-106 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O81445 Calcineurin B-like protein 1 | 1067 | 2e-115 |
Q9LTB8 Calcineurin B-like protein 9 | 992 | 1e-106 |
Q7XC27 Calcineurin B-like protein 1 | 881 | 8e-094 |
Q75LU8 Calcineurin B-like protein 3 | 708 | 1e-073 |
Q8LEM7 Calcineurin B-like protein 3 | 706 | 2e-073 |
TrEMBL top hits (Blast detail) | Score | e value |
Q2A995 Calcineurin B-like protein, putative | 1058 | 4e-113 |
A8IMA1 Calcium sensor protein | 999 | 3e-106 |
Q2A9K7 Calcineurin B-like protein, putative | 988 | 5e-105 |
Q2A9V0 Calcineurin B-like protein, putative | 983 | 2e-104 |
C4P7Y8 Calcineurin B-like protein 01 | 960 | 9e-102 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G17615.1 CBL1 (CALCINEURIN B-LIKE PROTEIN 1); calcium ion binding | 1068 | 2e-116 |
AT5G47100.1 CBL9; calcium ion binding | 993 | 8e-108 |
AT4G17615.2 CBL1 (CALCINEURIN B-LIKE PROTEIN 1); calcium ion binding | 806 | 4e-086 |
AT4G26570.1 ATCBL3 (ARABIDOPSIS THALIANA CALCINEURIN B-LIKE 3); calcium ion binding | 706 | 1e-074 |
AT5G55990.1 CBL2 (CALCINEURIN B-LIKE 2); calcium ion binding | 695 | 3e-073 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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