Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17490

FASTA Sequence
Unigene ID: UN17490Length: 760  SNP
GGTAGCTAAAAGTAAAATATATCATTTTACCAAACAGTAGAAACCTTACAAGAGACAAGAGGACGCATCGCCACCGTTAAAAACCA
TCACAGAAACTAGAGATCGAACGGTAACTAACAACAAGAAAGAAAAAGTTGCGAATACAGCAAAAAAAGAAAACAAGAAAAACACA
TTTTTTACATCACCGGCATGTCACTAGATCCTCTCGCTTTAACGGTGCTTGCTCCTGGTGTCGTCGCTGTACAGCCAGTCGTATAC
GGTGGGAGAGTTGGGGTGAGAAGGCTTATCAAAGAGGTTAGTTCCCATTCCTCTGGTGGCTATGTTGCTTCCTGGATGAAACACAC
TCCTCCACACGTTCTCCTTACGTGCTGACCCTGGCGTCGTCGGAGTTCCAGGACTCCCTGCCGCCGGGGTAGTCTTACTGCTGCTC
CCTTCTCCCACACCTTTGATGTCTATGGGTTGAGCGGTGATCTTATTGCGGAGACGGCCAAGGCCATGCTCCGGCTTAGGTCCAGC
AACAGTTTCATCCCACATCTTTTTCTTGCTTTTCTTTGTTTGATTTAGTAGTGATGTACTTTGGTTCAGGGCTTCCTTCATCTTAT
TTTATAGACTCATGGTAAAACTATTTATGAAAATATCTTCTTTTTCACCAATAAAATATCTAAGAAAATAATAAATAATTGGAAAT
ATATGAAAAGTAGAATTATCATCTTAACATGCCGTAATTTTTTTAATACATTCCATTAAACGTATACGAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850220 dormancy/auxin associated protein [Arabidopsis thaliana]5557e-055
XP_002881308 dormancy/auxin associated family protein [Arabidopsis lyrata subsp. lyrata]5422e-053
AAO32054 auxin-repressed protein [Brassica rapa subsp. pekinensis]5351e-052
NP_565772 dormancy/auxin associated protein [Arabidopsis thaliana]5271e-051
AAL67436 auxin-repressed protein [Brassica oleracea]5243e-051

Swiss-Prot top hits (Blast detail)Scoree value
Q05349 Auxin-repressed 12.5 kDa protein3368e-031

TrEMBL top hits (Blast detail)Scoree value
P93017 At2g33830/T1B8.135555e-055
Q8W155 Auxin-repressed protein5403e-053
Q84XQ2 Auxin-repressed protein (Fragment)5351e-052
Q8RYC4 Putative auxin-regulated protein5278e-052
O82561 Auxin-repressed protein3782e-034

Arabidopsis top hits (Blast detail)Scoree value
AT2G33830.2 dormancy/auxin associated family protein5562e-057
AT2G33830.1 dormancy/auxin associated family protein5331e-054
AT1G28330.1 DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)4164e-041
AT1G28330.4 DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)4111e-040
AT1G28330.3 DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)3708e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  11%
 
114  8%
 
184  8%
 
193  6%
 
2036  68%

Unigene MembersMember information