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Information for unigene UN17492
| FASTA Sequence |
| Unigene ID: UN17492 | Length: 949 |
| SNP | GAAAACAGTAGTTATGTCGTCTTCTCCAATTCCCTTTAGTCGGGAACCATAATTCCCCAATCGGAGAATTGTGAAGATCAAAGAAA
CAGGGAAAGATGCGGCGACGACCAGGAATCGGAGGGCTACAAAAGGCAGCTGCTGCTCGGGATCAGTACCGGTTATTAGGAGAGAA
TGTGGCCAAGTTACGAACTGATATGATGAAAGAACAGCTTGCCACTTTCAAGTCCCAGCTTGAAGAGTTCGCTCGTAAACACAAGA
ATGACATTCGTAAAAATCCAGCCTTTAGAGCTCAGTTCCATGAGATGTGTGCTAAAGTTGGTGTAGATCCACTAGCTTCAAACAAG
GGCTTCTGGGCTGAGCTCCTGGGAATTGGTGACTTCTACTATGAACTTGGAGTTCAGATTATTGAAGTTTGCATGCTTACAAGATC
ACTCAATGGAGGTTTGATCAGCTTGCAAGAGCTTTGCAGCCATCTTCGTCAGAGAAGGAAAAAAGACCGTGAAGCTGTCACCGAAG
ACGATTGTCTTCGAGCTATTAGCAAGCTAAAGGTATTGGGTAGTGGATTTGAGGTCATCACAATTGGCAAGAAAAAGCTTGTCCGT
TCAGTCCCCACCGAGCTCAACAAAGACCATAACCAAATCTTGGAGTTGGCTCAGGGTCAAGGCTTTGTGACTGTTGAAGAGGTACA
AAGACGGCTCTCGTGGACATCTGGTCGGGTCATAGATGCTCTCGAAACTTTGTTAGAGGAGGGCCTTGCAATGATCGACAATGGCA
GTAGAGACGGAAAATGTCAGTACTGGTTCCCCTGTGTCTCTTCTGTCTACTCATTCGTTGGATCTGATACTTAAAACTGTTAGATG
CTCTCTTTTGTATTCATGTTTTGTACTCAATACACTCGCTCTGTATTGCATATAAGTTACGAAAAAAATAATCTTATCAATATATT
CCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_194434 ESCRT-II complex subunit VPS22 [Arabidopsis thaliana] | 1238 | 6e-134 |
| XP_002867527 hypothetical protein ARALYDRAFT_913844 [Arabidopsis lyrata subsp. lyrata] | 1238 | 6e-134 |
| AAV91335 At4g27040 [Arabidopsis thaliana] | 1231 | 4e-133 |
| XP_002522973 Vacuolar sorting protein SNF8, putative [Ricinus communis] | 1117 | 7e-120 |
| XP_002319833 predicted protein [Populus trichocarpa] | 1110 | 4e-119 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q5M759 Vacuolar protein sorting-associated protein 22 homolog 1 | 1231 | 2e-134 |
| Q5RJU0 Vacuolar-sorting protein SNF8 | 643 | 3e-066 |
| Q96H20 Vacuolar-sorting protein SNF8 | 619 | 2e-063 |
| Q9CZ28 Vacuolar-sorting protein SNF8 | 619 | 2e-063 |
| Q5RK19 Vacuolar-sorting protein SNF8 | 619 | 2e-063 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SAF4 Vacuolar sorting protein SNF8, putative | 1117 | 5e-120 |
| B9I7T5 Predicted protein (Fragment) | 1110 | 3e-119 |
| B7FKV8 Putative uncharacterized protein | 1108 | 5e-119 |
| A9NU34 Putative uncharacterized protein | 1002 | 1e-106 |
| C5WUX2 Putative uncharacterized protein Sb01g044890 | 984 | 1e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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