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Information for unigene UN17496

FASTA Sequence
Unigene ID: UN17496Length: 972  SNP
TACAAAGAAACAGAAAAGAAGAAAAACTCTTTAGAGATCAAAAGATGAACATCGCTCACACCATCTTCGGCGTTTTCGGAAATGCA
ACTGCTCTGTTTCTCTTCTTGGCTCCTTCGATAACATTCAAGAGAATCATCAAGAGCAAATCGACTGAACAGTTCTCTGGCATCCC
TTACCCTATGACTCTCCTCAACTGCCTCCTCTCCGCCTGGTACGGACTTCCCTTTGTGTCCAAAGACAACACGCTCGTGAGCACGA
TCAACGGAACAGGAGCAGTGATCGAGACAATCTACGTGCTGATCTTCCTTATCTACGCACCAAAGAAGGAGAAAGCTAAGATCTTT
GGCATCTTCACCGCCGTCTTGGCCGTGTTCGCGACGGTGGCTCTCGTCTCTCTCTTTGCCCTCCATGGTAACGCTAGAAAACTCTT
TTGTGGTATTGCGGCCACAGTTTTCTCCATCATCATGTACGCTTCTCCACTCTCAATCATGAGGTTGGTGATAAAGACGAAGAGCG
TAGAGTACATGCCCTTCTTTCTCTCACTCTTTGTATTCCTCTGTGGAACTTCTTGGTTCATCTATGGTCTTATCGGTCGTGACCCT
TTTGTTGCAATCCCAAATGGGTTTGGATGTGCTTTAGGAACACTGCAGCTGATTCTCTACTTCATCTACTGCGGAAACAAAGGCGA
CAAATCTGCTGAAAAGGATGACAAGTCACTGGAGATGAGAGGTGAGGAGAAGAAGCAACATGTTGTTAATGCAAAGCAGCAAGAGC
AGCATGTTTAGATCTTTCAGTGATTTGTTTGTTTTCTCTGTATTTCGTGTTTAACTCTTCTTGATTAGAGCAGAGATTAAAAATCT
ATGCTGAACAAAATGTAAGATTCTTAGTGTCTTCCTAGTGATGAAACGAGTGATTAAAGAAGACTAATACCTTTGTGACATATACA
AATATATGTAAAACAAAACTCTGCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893163 nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata]11705e-126
NP_564140 Nodulin MtN3-like protein [Arabidopsis thaliana]11437e-123
XP_002526178 conserved hypothetical protein [Ricinus communis]9861e-104
XP_002307476 predicted protein [Populus trichocarpa]9521e-100
AAF87899 Unknown protein [Arabidopsis thaliana]9171e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 14372e-042
Q5EB14 RAG1-activating protein 1 homolog2088e-016
Q54JW5 RAG1-activating protein 1 homolog1953e-014
A8XI14 RAG1-activating protein 1 homolog1872e-013
O45102 RAG1-activating protein 1 homolog1801e-012

TrEMBL top hits (Blast detail)Scoree value
Q8L9J7 Putative uncharacterized protein11435e-123
B9SJK9 Putative uncharacterized protein9867e-105
B9H7N2 Predicted protein9527e-101
Q9LPL1 F24J8.9 protein9177e-097
C6TBS9 Putative uncharacterized protein9088e-096

Arabidopsis top hits (Blast detail)Scoree value
AT1G21460.1 nodulin MtN3 family protein11433e-125
AT4G10850.1 nodulin MtN3 family protein5062e-051
AT1G66770.1 nodulin MtN3 family protein4892e-049
AT5G53190.1 nodulin MtN3 family protein4847e-049
AT3G14770.1 nodulin MtN3 family protein4766e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  70%
 
92  20%
 
121  10%

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