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Information for unigene UN17499

FASTA Sequence
Unigene ID: UN17499Length: 924 SSR 
GGGAGCGTCGACAAAAAAGAGAATCCGGTGGGTGAGAGAGAGAGAATTGGCGACCCTTAGATTCAGTCGTAATATCTCTTGCGATC
ATCTGTGTGTTCTTATCGAATTGATAAACTTCTGTTGTGTGAGTTACTTTATTGAAGAAGCAATGATTGGACTGTTTAAAGTAAAG
GAGAAGCAAAGGGAACAAGCTCAGAACGCTAGCAGAGGAGGAGCTTCTGTCAAGAAGCAATCTGCCGGTGAACTTCGTCTCCACAA
AGATATATCAGAGTTGAACCTTCCAAGCTCGTGCACGATATCATTTCCCAATGGCAAAGATGATTTGATGAACTTTGAAGTCTCCA
TTAAACCCGATGATGGTTTCTACCATAATGGTAAGTTTGCTTTCACCTTCCAAGTCTCTCCTGTCTATCCACATGAAGCTCCTAAA
GTTAAATGCAAAACCAAGGTTTATCATCCCAATATCGATTTGGAAGGAAACGTTTGCCTCAACATCTTGCGCGAAGACTGGAAACC
TGTTCTCAACATTAACACTGTCATCTATGGACTCTTCCATCTTTTCACCGAACCCAACTCTGAAGATCCTTTGAACCATGAAGCTG
CGCAGGTTTTAAGGGATAACCCAAAGCTCTTTGAGACCAATGTCCGGAGAGCTATGACCGGTGGATATGTTGGTCAAACCTTCTTC
CCTCGCTGTATCTAACAAAAAAAGCTCTGGTTGGTCTTCTTCAAGCAAGAAAGATAAGAACCTGAAAACCACTTTATCCTCCAATG
TAATTCCTGTCTCAAAGGACCCTTGTTTGTTTGCTTGCCTTTGAAAAATTACGTTCTCCCTTTCCCTTAGAGACTGAAAGGAAATG
AAAACTCAAAAATTGTGGATTTGGTTTTTCGGTTTCAGTTTATTAAAGTGTGTGGTAATTAATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33605 unnamed protein product [Thellungiella halophila]9572e-101
NP_001154289 NEDD8-conjugating enzyme Ubc12 [Arabidopsis thaliana]9563e-101
ACI16426 RUB1-conjugation enzyme [Brassica juncea]9402e-099
XP_002525098 ubiquitin-conjugating enzyme m, putative [Ricinus communis]8632e-090
XP_002886185 hypothetical protein ARALYDRAFT_343491 [Arabidopsis lyrata subsp. lyrata]8561e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDY5 NEDD8-conjugating enzyme Ubc129561e-102
Q9ZU75 Probable NEDD8-conjugating enzyme Ubc12-like8305e-088
A3KN22 NEDD8-conjugating enzyme Ubc126092e-062
P61081 NEDD8-conjugating enzyme Ubc126092e-062
P61082 NEDD8-conjugating enzyme Ubc126092e-062

TrEMBL top hits (Blast detail)Scoree value
B6E0M7 Ubiquitin carrier protein9401e-099
B9SGH9 Ubiquitin carrier protein8631e-090
C6SV99 Ubiquitin carrier protein8522e-089
A9PAZ9 Ubiquitin carrier protein8452e-088
A5AHT5 Ubiquitin carrier protein8325e-087

Arabidopsis top hits (Blast detail)Scoree value
AT4G36800.1 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9579e-104
AT4G36800.2 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase9579e-104
AT2G18600.1 RUB1-conjugating enzyme, putative8314e-089
AT5G56150.1 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2401e-020
AT5G56150.2 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2401e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  60%
 
121  20%
 
91  20%

Unigene MembersMember information