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Information for unigene UN17505

FASTA Sequence
Unigene ID: UN17505Length: 904  SNP
AGGGGATTCTCCTTTGGCCTATTCAAATCAAATTAAGAATCTCTTCTTCCCCAAAAATTTTAATTTCCCTTTTCTTGTTGTTCGTT
TCACAAAAGAGGACAAAAACAAAACAAAACAAGAAGAAGTCACATCTCTCTAATCTATTTGCTGTCTTAGGTTTACCTCCATCAAC
CAAACGCAATGGCGAACGCAGCGTCAGGAATGGCGGTGGTAGACGAATGTAAGCTCAAGTTTTTGGAGCTAAAAGCGAAAAGAAAC
TATAGGTTCATAATATTCAGGATAGATGGACAACAAGTGGTGGTCGAAAAACTTGGAAGTCCCGAGGAGAACTACGACGATTTCTC
CAATTCTCTTCCGGCCAACGAGTGCCGCTATGCCGTCTATGACTTCGACTTCACCACTGTTGAGAATTGCCAGAAGAGCAAAATCT
TCTTCATAGCATGGTCACCGGATTCTTCGAGTGTGAGGATGAAGATGGTGTATGCCAGCTCAAAGGACAGGTTCAAGAGAGAATTG
GATGGTATTCAGGTGGAATTACAAGCCACGGATCCGAGTGAGATGAGTTTTGACATCATCAAAAGTCGTGCTCTCTAGATTCATAT
GTGCCTGATTCCTTATCATATATCCATAAGTGCTCCATCATCATTATTTCAAAGAACTTCTCCATGTTGTGTAACTTTTGTTGGTT
TCATTCTTTCTTCTTCCTCTTGGCTCTTTTTAATCTTTTTTTATTTGTATTTAAACTTGACGTGGGTTTTATACTCTGGCTTGGGA
TAAGCTGTAAAACCATGTAGTTTATCGTGTAATTGCTGGCATAAAAAAATAAAACGTATTACTTTTCCAATGCAGCAATATGTAAG
CTCACTTAGAACATAATTATAACCATCACGATTTTTCTCGTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865909 hypothetical protein ARALYDRAFT_495305 [Arabidopsis lyrata subsp. lyrata]6751e-068
AAL91667 pollen specific actin-depolymerizing factor 2 [Nicotiana tabacum]6581e-066
NP_568769 actin depolymerizing factor 10 [Arabidopsis thaliana]6534e-066
AAM61402 actin depolymerizing factor-like [Arabidopsis thaliana]6491e-065
NP_194289 actin depolymerizing factor 7 [Arabidopsis thaliana]6472e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH6 Actin-depolymerizing factor 126532e-067
Q67ZM4 Actin-depolymerizing factor 76479e-067
Q9LQ81 Actin-depolymerizing factor 105789e-059
P30174 Actin-depolymerizing factor (Fragment)5733e-058
Q570Y6 Actin-depolymerizing factor 85672e-057

TrEMBL top hits (Blast detail)Scoree value
Q8H2B6 Pollen specific actin-depolymerizing factor 2 (Fragment)6587e-067
A6QRD0 At5g523606533e-066
B9R9B0 Actin depolymerizing factor, putative6211e-062
Q8H2B7 Pollen specific actin-depolymerizing factor 16211e-062
B9I489 Actin depolymerizing factor 106192e-062

Arabidopsis top hits (Blast detail)Scoree value
AT5G52360.1 ADF10 (ACTIN DEPOLYMERIZING FACTOR 10); actin binding6541e-068
AT4G25590.1 ADF7 (actin depolymerizing factor 7); actin binding6486e-068
AT1G01750.1 ADF11 (ACTIN DEPOLYMERIZING FACTOR 11); actin binding5788e-060
AT4G00680.1 ADF8 (ACTIN DEPOLYMERIZING FACTOR 8); actin binding5672e-058
AT3G46000.1 ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin binding5582e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  13%
 
104  50%
 
113  38%

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