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Information for unigene UN17515

FASTA Sequence
Unigene ID: UN17515Length: 1193  SNP
GTCAAGGTTTTTTTTTCTCTACCATTTCCTTTAAAATCATTATAGGAAAATTCGAAAAGCTTTTAGAAACAGAAAAGCCCACGTGG
GGCTAGATTAAAGGAGATCTACAAATTGACGGCGTCAAGTCAACGTGCAACTAAAAGTACCGTCAAAGGTTTAAAAAGTTAACGGA
GATAAATATTACACGATTAAGTAAAAAACAAGCTTTATTAATCTAATAATAATCCGGGACTTCCCATCTTCTGCCGTCGTACCGGC
GATTCCTCCGGCGTCGGCGAAGACTCCGGCGACGATGGCAACACATCGTCATCTTCATCGTCTATTGGATATGAGAGTGGCGAGGA
AAATATCTCCACGGGAGATAACGGCGGAGAAGAGTCCGACGTTTCAGGCGAGATAGTCACCGGCGGAGAAGACTCCGAAGATTCAG
GCGAGTTAGTCGACGGCGGAGAAGAGTCCGACGAATCAGGCGACGATGGAGGAGGAAGCGAGGTTTGCATGGGAACAGAATCTTCC
GGAAGCTTCCGTTTGTTTGCGTTGGAAAGTTTAACGTCTCTGTTTAAATAGCTTCTCAGGCGCTTCACGTCGGCGAGTTTCACCGG
TTTTAATAAGAAGTCCTCCGCACCTTCCTCAAGACATCTGTCGATTCTGGTTAAGACATTCTCTGACGACATTATTACCACCGGAA
CTTGTCGGAAACTGGACGATTCCTTTATCTTTTTGAGGAGCTCGTAGCCAGTCATTCCAGGCATACAGTAATCAGTGATGATCAAA
TCAACTTTCAATCTATCTAGTTCTGCAGATGCTTTCTCGTTGTCTAGTCCTAGAAACTCCAGAGCACGCCATCCGCTATCTACCGC
CGTGACTTTGCAGGAAGTAATACGAAGCAATCTCTCGATGACAATCCGATCAACGAGGCTGTCATCAACGGCCAGGACATGAACTT
CATCTAACTCCAACGGCGGAGATTCCATTTTTCCGATACCGACGCTCATCATCTCTGAACTCCGTAGGCAAGAAACGCCACCGTCT
CTGGCCATAGATGAGTTGCAGTACTAGTAACTGAGAGGACAAGAACAAAATAGCACAGAGAGAGAGGAACAAGAGCTCTCACGCCT
GGGTTTATTTTCTTCCTCTTCTCCTCATCCAGACAGTTTTTATATTCCCAACTTTTTTTTCTCTCTCACTCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172517 two-component response regulator ARR4 [Arabidopsis thaliana]9215e-097
XP_002892573 hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp. lyrata]8883e-093
NP_176202 two-component response regulator ARR3 [Arabidopsis thaliana]8104e-084
XP_002886648 predicted protein [Arabidopsis lyrata subsp. lyrata]7827e-081
CBI32076 unnamed protein product [Vitis vinifera]6133e-061

Swiss-Prot top hits (Blast detail)Scoree value
O82798 Two-component response regulator ARR49212e-098
Q9ZWS9 Two-component response regulator ARR38102e-085
Q9ZWS7 Two-component response regulator ARR75261e-052
Q9ZWS6 Two-component response regulator ARR65037e-050
Q7G8V2 Two-component response regulator ARR154912e-048

TrEMBL top hits (Blast detail)Scoree value
Q2HIV3 At1g104709214e-097
Q29PQ8 At1g599408103e-084
A5AP69 Putative uncharacterized protein6079e-061
Q9AXD7 Response regulator protein6061e-060
B9S2I2 Two-component sensor protein histidine protein kinase, putative5925e-059

Arabidopsis top hits (Blast detail)Scoree value
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator9212e-099
AT1G59940.1 ARR3 (RESPONSE REGULATOR 3); transcription regulator/ two-component response regulator8101e-086
AT1G19050.1 ARR7 (RESPONSE REGULATOR 7); transcription regulator/ two-component response regulator5261e-053
AT5G62920.1 ARR6 (RESPONSE REGULATOR 6); transcription regulator/ two-component response regulator5036e-051
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator4911e-049

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  9%
 
103  27%
 
83  27%
 
64  36%

Unigene MembersMember information