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Information for unigene UN17528
| FASTA Sequence |
| Unigene ID: UN17528 | Length: 1713 |
SSR | | GGATGTCATAATGGACGGTGGAGACAACGTTGGAGGAGATGATCACAACCGTCACCTTCACCACCACCATCACCGGCCAACTTTCC
CTTTCCAACTCCTCGGAAAACGAGACCCCGACGACAACAACCAACAACAACAACAACAACAGCAACCTTCCCCCTCCTCTTCCTCA
TCTCTCTTCTCCCTCCACCAACACCAACAATTATCCCAAACGCAGCAACCGCAACCGCAGCAAAAGCCAGAACCGCAGAAAGACTT
GCAAGAGGAAACAGCGGTGGTCGTAGCTAAAAAGCCGCCGTTAAAACGAGCGTCGACGAAAGACAGACACACGAAAGTAGACGGAA
GAGGGAGGAGGATAAGGATGCCGGCCTTGTGCGCAGCTAGGGTTTTCCAGCTAACAAGAGAGCTCGGCCATAAATCTGACGGAGAG
ACCATCGAGTGGCTTCTTCAACAAGCTGAGCCGTCGGTCATCGCCGCCACCGGAACAGGAACTATCCCGGCGAACTTCACTTCTCT
CAACATCTCTCTCCGTTCTTCAGGCTCCTCCATGTCTCTCCCTTCTCATTACCGTAACGCAGCTTCCACTTTCAGCCCTAACAACA
TCTTCTCCCCGTCGTTACTTCAACAACAACAACAAAGAAGCGGTGGTGGTGGGTTTCTTCATCCTCACCATCATCTACAAGGACGT
GCGACGACGTCTCTCTCTTTCCTGGTATCGATAACTTCACCCCGACAACGTCGTTTTTGAACTTCCATAATCCGACAAATCAAGAA
GGAGATCAAGATTCGGAAGAGTTAAGTTCAGACAAGAAACGGAGACTCCAAACGGCGTCGGATATACATCATCAACATGAACAAAT
CGGTGGCTATACGCTTCAGTCTAGCAACAGTGGTTCCACGGCTACAACCGCGCAAATACCAGGAAACTTCTGGATGGTTGCGGCTG
CGGCGGCGGCCGTAGGTGGTGGTAATAATAACCAAACAGGAGGAGTTTCTGGAGGCAGTGGTGGTGGTGGAGAGCCTGTGTGGACG
TTTCCTTCGATTAACACTGCCGCTGCTGCCTTATACAGAAGTAGCGTTTCGGGCGTTTCAGGCGGTGCGGTTTCAAGCGGTTTGCA
TTTTATGAATTTTGCAGCGCCAATGGCATTTCTTACTGGACAACAGCTAGCAACCAGTAGTAATCATGAGATCAATGAAGATAATA
ATAATAATGAAGGAGGTAGAAGAAGTGACGGTGGGGATCATCATAGTACACATGAGAGACATCATCATCATCAACAACAACAGCAT
CATAATATTCTCTCCGGTTTAAATCAGTACGGACGGCAAGTTTCAGGCGAATCTCAGGCTAGTGATTCACTTGGAGGCGGTGAGGA
AGATCCACAAGATTAAAAATACACAAAGAAAACAAACACAACTAATCGTGGATGACCCGGCGGCGCCGGTGGTGGAGACGGCGTTC
GGCGGCTGTGTAATACTTTTGTTTTGCCGTTATTTTTTATTTTTCACTGTCTGTATTAATTTTTTTTTTGCTAAGTTAAAAACAAA
AATACGCGAGAACGTGAGATTTTTTTTAGTTTTGATTTTTTTTTTACTTTGATTTAAATTTGAGTTTTTATTGTGAGTGAGTGAGT
GATTAAATAGTACACGAGATTTTCTCTGTCAGTTTTTTTTGGATTTTGAGGAGAATATGACACTTTTTATCATTATTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34387 unnamed protein product [Thellungiella halophila] | 1011 | 3e-107 |
| XP_002875855 hypothetical protein ARALYDRAFT_485126 [Arabidopsis lyrata subsp. lyrata] | 981 | 9e-104 |
| NP_190346 transcription factor TCP14 [Arabidopsis thaliana] | 961 | 2e-101 |
| CAB61988 putative protein [Arabidopsis thaliana] | 961 | 2e-101 |
| ADL36836 TCP domain class transcription factor [Malus x domestica] | 551 | 7e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93Z00 Transcription factor TCP14 | 1004 | 8e-108 |
| Q9C9L2 Transcription factor TCP15 | 436 | 6e-042 |
| Q9C518 Transcription factor TCP8 | 400 | 9e-038 |
| Q9LQF0 Transcription factor TCP23 | 390 | 1e-036 |
| Q9C7G4 Transcription factor TCP22 | 378 | 3e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R988 Transcription factor, putative | 550 | 6e-054 |
| B0KYV1 TCP domain-like protein I | 544 | 3e-053 |
| Q9SPJ7 Auxin-induced basic helix-loop-helix transcription factor | 544 | 3e-053 |
| B9S8T6 Putative uncharacterized protein | 468 | 2e-044 |
| Q70I19 TCP-domain protein | 468 | 2e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G47620.1 AtTCP14 (TEOSINTE BRANCHED1, CYCLOIDEA and PCF (TCP) 14); transcription factor | 1005 | 6e-109 |
| AT1G69690.1 TCP family transcription factor, putative | 436 | 5e-043 |
| AT1G58100.1 TCP family transcription factor, putative | 400 | 8e-039 |
| AT1G35560.1 TCP family transcription factor, putative | 390 | 1e-037 |
| AT1G72010.1 TCP family transcription factor, putative | 378 | 3e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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