 |
Information for unigene UN17539
| FASTA Sequence |
| Unigene ID: UN17539 | Length: 1183 |
SSR | | GGATCAGCCAACTCCACCACCACACAACTCTTGAAAGCACTCTCTTGTCTCTCTCTTGCTCACATTCATCCAACTCTCCAGGTATG
TCTACATCCGAGAACAAAGTTGAAGTCGTTGACAGAGCTCACAAGGAGGATGAAAAAGAAGAAGAAGGTAAAGGTGGATTCCTAGA
CAATGTCAAAGGTTTCATTCACGGCATCGGCGAGAAGATACAGGGAACCGTCGGTTTCGGGAAGCCAACAGCTGACGTCTCAGCCA
TTCACATCCCCAAGATCAATCTCGAGAGAGCAGACATTGTCGTAGACGTGCTCGTCAAGAACCCCAACCCAGTTCCCATCCCTCTC
ATCGACATCGACTACTTGATCGACAGTGACGGGAGGAAACTCGTCTCCGGACTGATCCCTGACGCTGGAACCATCAAGGCGCATGG
AGAAGAAACCGTCAAGATACCGTTGACTCTGATCTACGACGACATCAAGAGCACTTACAACGACATTAACCCCGGGATGATCATAC
CTTACAGGATCAAAGTTGATCTCATCGTCGACGTGCCTGTCTTGGGGAGGCTCACGTTACCGTTGGAGAAGCGTGGAGAGATTCCC
ATCCCGAAGAAACCTGATGTTGACATCGAGAAGATCCAGTTCCAGAAGTTTTCTTTGGAAGAAACCGTGGCGATACTCCACGTGAG
GCTTGAGAACTTGAATGATTTTGATTTGGGGGTTAATGACTTGGACTGTGAAGTGTGGTTGGCTGATGTGAGTATTGGGAAAGCAG
AGATATCTGACTCTGTAAAGCTTGATAAAAACGGAAGTGGGTTGATTAATGTGCCGATCACGTTCAGGCCAAAGGACTTTGGGTCT
GCGCTTTGGGATATGATACGTGGTAAAGGGACTGGGTACACTATTAAAGGTAATGTGGATGTTGATACACCGTTTGGGGGTATGAA
GCTTCCTATTATCAAGGAAGGTGGTGAGACTCGTCTGAAGAAGGAAGATGATGATGATGATGATGAGGAATAAGGAAAAGAGGTCA
AGAGAATGAGGGATGAATCTCTGATGTTTAAAAATAATGTCTAAAAGTTAAATGAAAAGACTTGTTTGTTGTGCTTTTATGGTGGA
TATCAGACTTTTGAACAGAGCTGTGTGGACTTCTTATATATCATCGTGGTCCGGTTTTATTGGTT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880080 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1479 | 1e-161 |
| NP_181934 Late embryogenesis abundant protein, group 2 [Arabidopsis thaliana] | 1469 | 1e-160 |
| AAM64433 similar to late embryogenesis abundant proteins [Arabidopsis thaliana] | 1464 | 5e-160 |
| CBI24768 unnamed protein product [Vitis vinifera] | 1259 | 3e-136 |
| XP_002533345 Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis] | 1254 | 1e-135 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82355 Desiccation-related protein At2g46140 | 204 | 3e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80576 At2g44060 | 1469 | 1e-160 |
| Q8LCW6 Similar to late embryogenesis abundant proteins | 1464 | 4e-160 |
| B9T526 Late embryogenesis abundant protein Lea14-A, putative | 1254 | 8e-136 |
| A5B1L7 Putative uncharacterized protein | 1251 | 2e-135 |
| A9PFS2 Putative uncharacterized protein | 1248 | 4e-135 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44060.1 late embryogenesis abundant family protein / LEA family protein | 1470 | 4e-163 |
| AT2G44060.2 late embryogenesis abundant family protein / LEA family protein | 1470 | 4e-163 |
| AT2G46140.1 late embryogenesis abundant protein, putative / LEA protein, putative | 204 | 3e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
