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Information for unigene UN17542

FASTA Sequence
Unigene ID: UN17542Length: 1126 SSR 
CACTAAAACTCTTAAGCAAGAAGAGTTTATAAAAAAAAAATTAAGAGAAACAAAGACAAATCATTGAAAGAACTAAACTTGCTGCT
CTTGCTGCTTCCCGTTAACAACATGTTGCTTCTTCTCCTCACCTCTCATCTCCAGCGACTTGTCATCCTTTTCAGCAGATTTGTCG
CCTTTGTTTCCGCAGTAGATGAAGTAGAGAATCAGCTGCAGTGTTCCTAAAGCACATCCAAACCCATTTGGTATTGCAACAAAAGG
GTCACGACCGATAAGACCATAGATGAACCAAGAAGTTCCACAGAGGAACACAAAGAGTGAGAGAAAGAAGGGCATGTACTCTACAC
TCTTCGTCTTTATCACCAATCTCATGATTGAGAGTGGAGAAGCGTACATGATGATGGAGAAAACTGTGGCTGCAATACCACAGAAG
AGTTTTCTAGCGTTACCATGGAGGGCAAAGGGAGAGACGAGAGCCACGGTTGCGAATACGGCCAAGACGGCAGTGAAGATGCCAAA
GATCTTAGCTTTCTCCTTCTTCGGTGCGTAGATAAGGAAGATCAGCACGTAGATTGTCTCGATCACTGCTCCTGTTCCGTTGATTG
TGCTCACGAGCGTGTTGTCCTTTGACACAAAGGGAAGTCCGTACCATGCGGAGAGGAGGCAGTTGAGGAGAGTCATAGGGTAAGGG
ATGCCAGAGAACTGTTCAGTCGATTTGCTCTTGATGATTCTCTTGAATGTTATCGAAGGAGCCAAGAAGAGGAACAGAGCAGTTGC
ATTTCCGAAAACGCCGAAGATGGTGTGAGCGATGTTCATCTTTTGATCTCTAAAGAGTTTCTCTTCTTTTTTGTTTCTCTGTACTA
TTTGATGTGAAGAAGAGGGAAAAAGTGAGAGAGAATGTGGTGAGTGTTGTCCCCCGGCCGTAAGCAGTGGTATCAACGCAGAGTGG
TAAGAGTCGAGCTAAGCAAAAGGCGGAGGCGTTGATTGAACTTCTAAGGCAGCCAAGACAGCAACACACTTAGATTCTAGCAAAGA
CGAGAGAGAGAGAGAGAGAGTATGTGACTGATAATGAATCTCATCTTCGGTATTGTAAACATCTTTTGAATCTCATTCTAAATTTT
GTGAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893163 nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata]11698e-126
NP_564140 Nodulin MtN3-like protein [Arabidopsis thaliana]11421e-122
XP_002526178 conserved hypothetical protein [Ricinus communis]9852e-104
XP_002307476 predicted protein [Populus trichocarpa]9512e-100
AAF87899 Unknown protein [Arabidopsis thaliana]9162e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 14302e-041
Q5EB14 RAG1-activating protein 1 homolog2034e-015
Q54JW5 RAG1-activating protein 1 homolog1935e-014
A8XI14 RAG1-activating protein 1 homolog1854e-013
O45102 RAG1-activating protein 1 homolog1783e-012

TrEMBL top hits (Blast detail)Scoree value
Q8L9J7 Putative uncharacterized protein11428e-123
B9SJK9 Putative uncharacterized protein9851e-104
B9H7N2 Predicted protein9511e-100
Q9LPL1 F24J8.9 protein9161e-096
C6TBS9 Putative uncharacterized protein9062e-095

Arabidopsis top hits (Blast detail)Scoree value
AT1G21460.1 nodulin MtN3 family protein11424e-125
AT4G10850.1 nodulin MtN3 family protein5027e-051
AT5G53190.1 nodulin MtN3 family protein4849e-049
AT1G66770.1 nodulin MtN3 family protein4821e-048
AT3G14770.1 nodulin MtN3 family protein4695e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
81  33%
 
101  33%

Unigene MembersMember information