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Information for unigene UN17551
| FASTA Sequence |
| Unigene ID: UN17551 | Length: 791 |
SSR | | GGATCTCTTGGAAAGACAAAAAAATGAATCGTGTGATCTTCTTCCTCCTCACAGCAGCCGCTCTACTCGTCGCCATCACGGGCCAC
GTATCAGAAGACGGTTTCGATAACCCGATCATCAGGCAAGTCGTCCCGGAAGAAGCAGACTATCCTTATACAGGACATGACAATTC
CGGCTGCAAGTTCGACAAGAGCATGATCGCCGCAAGAGTGTCTAATTTCAGCGTTGTCTCTGCGGATGAAGATCAAATCGCTGCAA
ATCTAGTCCACCACGGTCCTCTTGCTATTGCTATCAATGCAATGTGGATGCAAACTTACATAGGAGGAGTCTCGTGCCCGTATGTA
TGTTCTAATAGCCAAGACCATGGAGTGCTCTTGGTTGGGTTTGGCTCGTCGGGTTATGCACCAATCCGTCTCAAGGAGAAGCCTTA
CTGGATCATAAAGAACTCATGGGGAGAGACGTGGGGCGAGCATGGTTACTACAAAATCTGCAGGGGACGTCATAACATCTGTGGTA
TGGACACAATGGTATCTACTGTTGCTGCTGTTCATACCTCAACTCAGTAGAACTATTAGGACACTACTGGGTTTTACCTGTCCTTG
TGTGTATATTATATATATATATGTGTATCTGAATAACAACTATGGACTGTTATTTTTATTATTATCGTCAATTTGTTTCAGTTTTA
ATGTAAAATATAGCCTTGGGGTGTCGTTATCCTTGTAGCATCGAATGCTAAAGAAAAGTGATATGATGATCAGTTTATAAGTATGT
AATAATGGAAGTTTTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870174 hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp. lyrata] | 701 | 8e-072 |
| NP_567489 Papain family cysteine protease [Arabidopsis thaliana] | 693 | 7e-071 |
| ABK94746 unknown [Populus trichocarpa] | 621 | 2e-062 |
| ABK94801 unknown [Populus trichocarpa] | 616 | 6e-062 |
| ABK96580 unknown [Populus trichocarpa x Populus deltoides] | 616 | 6e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25804 Cysteine proteinase 15A | 571 | 5e-058 |
| P43296 Cysteine proteinase RD19a | 571 | 5e-058 |
| Q10716 Cysteine proteinase 1 | 569 | 8e-058 |
| P43295 Probable cysteine proteinase A494 | 553 | 6e-056 |
| P05993 Cysteine proteinase (Fragment) | 444 | 2e-043 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SUL1 AT4g16190/dl4135w | 693 | 5e-071 |
| A9PEE3 Putative uncharacterized protein | 621 | 1e-062 |
| A9PEJ8 Putative uncharacterized protein | 616 | 4e-062 |
| A9PJM7 Putative uncharacterized protein | 616 | 4e-062 |
| B9GRH2 Predicted protein | 616 | 4e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16190.1 cysteine proteinase, putative | 694 | 2e-073 |
| AT4G39090.1 RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase | 571 | 4e-059 |
| AT2G21430.1 cysteine proteinase A494, putative / thiol protease, putative | 553 | 5e-057 |
| AT3G54940.2 cysteine-type endopeptidase/ cysteine-type peptidase | 479 | 2e-048 |
| AT2G34080.1 cysteine proteinase, putative | 197 | 1e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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