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Information for unigene UN17562

FASTA Sequence
Unigene ID: UN17562Length: 992  SNP
GGATAGCCGGTGTTGACTTTGATCAGATCGGCGACGAAAATGGGAAACACGAGAATCTCGATCTTCATATTGGCGTGTGTATCCTT
ACTCTCCCTAGTCAAAGCTCTTCCTAGCGAACCAGAACTTGGCTCAGCTCGTGTCGTCTTCCAGACTAGTTATGGGGATATCGAGT
TTGGGTTCTATCCCACGGTTGCGCCAAAGACAGTGGATCACATCTTCAAGCTCGTTCGTTTAGGTGGATACAATACTAATCATTTC
TTCAGGGTGGATAAAGGCTTTGTTGCTCAAGTTGCTGACGTGGCGAGTGGAAGATCAGCCCCGATGAACGAGGAGCAAAGGAAAGA
AGCCGAGAAGACTATTGTTGGAGAGTTCAGTGATGTCAAGCATGTAAGAGGCACTCTTTCCATGGGAAGATATGAAGATCCAAACA
GTGCACAATCTTCATTTTCAATGCTTCTTGGTGACGCTCCTCATCTTGATCGTCAGTACGCAGTGTTCGGCAAAGTAACTAAAGGT
GATGAAACATTGAGGAAGCTAGAAGAAGTTCCTACTCGCCGTGAGGGGATCTTTGTAATGCCGACGGAGAGGATCACGATTTTGTC
GACATACTACTACGACACTAAGATGGAGAGCTGTGAAGTGGAGAGATCTGTCCTGAAAAGAAGGCTTGAAGCATCTTTTGTTGAGG
TCGAAAGACAGAGAATGAAGTGCTTCCCGTGAAACTATGTTAATGACATTTTTTCTAAGTAAAGAACTGTTCATAAACAGAGCCTA
AAACAAAGTTAAAGCCGACATCTTTGTTTCATTTGGTGTAACTCACGATGCTAAGACACATATTCATTAGTTTTTAGTCTATGCCG
CTGTCCGTTTGTCCATTTGGTCATCTCGCTGTAGATGATCTTTTTATCTTCTGATCCATCCAATAGATCTATCTGAATATTATTTT
GACTATTAGTATGATTCATTTAAATAAATCATCTAATTGGGTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893370 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata]10675e-114
NP_564267 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]10666e-114
XP_002276441 PREDICTED: hypothetical protein [Vitis vinifera]9232e-097
ACU20628 unknown [Glycine max]9142e-096
ACJ86078 unknown [Medicago truncatula]9107e-096

Swiss-Prot top hits (Blast detail)Scoree value
Q2YPY5 Probable peptidyl-prolyl cis-trans isomerase2231e-017
Q57D43 Probable peptidyl-prolyl cis-trans isomerase2231e-017
Q8YHB5 Probable peptidyl-prolyl cis-trans isomerase2231e-017
Q8G0J9 Probable peptidyl-prolyl cis-trans isomerase2231e-017
Q5ZLV2 Peptidyl-prolyl cis-trans isomerase-like 31721e-011

TrEMBL top hits (Blast detail)Scoree value
Q8LDR3 Putative uncharacterized protein10664e-114
C6TFM6 Putative uncharacterized protein9142e-096
B7FMU5 Putative uncharacterized protein9105e-096
Q9ZVG4 T2P11.13 protein9097e-096
B9HXT8 Predicted protein8999e-095

Arabidopsis top hits (Blast detail)Scoree value
AT1G26940.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein10672e-116
AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase1612e-011
AT4G33060.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein1479e-010
AT1G01940.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein1291e-007
AT2G15790.1 SQN (SQUINT); peptidyl-prolyl cis-trans isomerase1272e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  22%
 
92  22%
 
104  44%
 
201  11%

Unigene MembersMember information