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Information for unigene UN17566

FASTA Sequence
Unigene ID: UN17566Length: 1470 SSR 
GGAGTCAGAAAATGTGAAGAAATTATTTCATAGCTGGAGTTCTTTACATTAGAGCTACATGCAACTCACTCACTAGCAGTAGTAAT
ACAGCATTTAAACAAACAAATAGGATTACAAGAGTACACATGTAAAAAGTACATGAATAAAAGAACAGGTAAAGATACTAGGGGGC
AGCGATTCGGATGGATAGTTTGGGTAAAATAAATGCCATTCATTCGGTTGCAGCTCTTCTAAGCATATGTAGGATTGAGTGCAATG
GCTTCCCTGTAGATCATCTCTTTTATCTGTTCCTCATCTAGAGGTTGTTGTTCAAAGTCGAAAGAGAATGGCTTTAGACAGATTGG
CTCATCATTTGGGTCGTGCAACTTGGCAAGGTACGGGTGGTTCAGAGCTTCTTCAACAGTGATTCTTTTGTTGGGGTCAAAAGTCA
ACATTCTGTCAACAAGATCAATGGCCAATGGGTTAACATGAGAGAAAAGTTTAGCTAACGGCTGGCGAGGGAAGGTGGGGAGTTGC
CGGATGTATCTTTTAGCATCCTCGTTGTGTGTAAACCCGAGATCTGATTCTGTCGGCGTGCCAAGCAACTCTGTCAATAAGCGCAT
CTGATGGACATGGTCTTTACCAGGGAACAAAGGCTTTCTGTTCATGAGCTCCATAAAGATACAACCAACAGACCAAACATCTATAG
CAGCAGTGTAATCCGATGAGTTCAACAGAAGCTCAGGTGCTCTGTACCATCTGGTAACAACATACTCGGTCATAAACTCGTTCTCC
GAAGTCGGTCGAGCAAGACCGAAGTCACAGATCTTTAAATCGCAGTTCGCGTTCAGGAGAAGATTGCTCGGTTTTAGATCTCTGTG
GATAACTTTAGCCGAGTGGATGTACTTGAGCCCTCGAAGAAGCTGGTACAAGAAGTACTGACAGTGTTCCTCAGACAAACCCTGGT
TGGATCTGATGATTTGATGAAGATCAGTGTCCATTAACTCAGTGGCAATATAAACATCACTGAACTGTCTTCTAAGTGGTGGAGGA
ACCACATCTCTTATAGCTATGATGTTTTCATGATCGAGATGACGAAGAAGCTTGATCTCGCGAAGTGTACGCTTGGCGTCCATGTG
ATTATCAAAGGCGTTGGCTATCTTCTTCATCGCCACTAGCTCGTTCGTCTCCGAATCCAAAACAGAGCAAACGATGCCGTATGCGC
CTCGACCGATTGGTACAATCGGAGGACGGTACTTGGATGTGATCTCGAATAAACTACCGAAGATATCATAGCTTATGAACTGTCCT
CCGTGCGTTTGCACCGCCGGAAACTCTGGATATTGGCCGCCAGCGTTATTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTAAATCGATCGATCGATCACGCGCTTAGTCAACTTCAAAGCTTTGACTCTGTTGTTGTGCTTTGAGAG
GTGGTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAV34677 mitogen-activated protein kinase 3 [Brassica napus]19342e-214
XP_002875737 mitogen-activated protein kinase 3 [Arabidopsis lyrata subsp. lyrata]18761e-207
AAV68711 mitogen-activated protein kinase 3 [Chorispora bungeana]18752e-207
NP_190150 extracellular signal-regulated kinase 1/2 [Arabidopsis thaliana]18733e-207
ABG54330 double HA-tagged mitogen activated protein kinase 3 [synthetic construct]18733e-207

Swiss-Prot top hits (Blast detail)Scoree value
Q39023 Mitogen-activated protein kinase 318731e-208
Q07176 Mitogen-activated protein kinase homolog MMK115281e-168
Q40532 Mitogen-activated protein kinase homolog NTF415235e-168
Q06060 Mitogen-activated protein kinase homolog D515172e-167
A2XFC8 Mitogen-activated protein kinase 515039e-166

TrEMBL top hits (Blast detail)Scoree value
Q5IV18 Mitogen-activated protein kinase 319342e-214
Q5PZV2 Mitogen-activated protein kinase 318751e-207
Q0WVS7 Mitogen-activated protein kinase 318732e-207
B8LFE0 Putative MAP kinase 317102e-188
A2IB54 Mitogen-activated protein kinase17031e-187

Arabidopsis top hits (Blast detail)Scoree value
AT3G45640.1 ATMPK3 (ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE 3); MAP kinase/ kinase/ protein binding / protein kinase18748e-210
AT2G43790.1 ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6); MAP kinase/ kinase15011e-166
AT4G01370.1 ATMPK4 (ARABIDOPSIS THALIANA MAP KINASE 4); MAP kinase/ kinase13585e-150
AT4G11330.1 ATMPK5 (MAP KINASE 5); MAP kinase/ kinase13066e-144
AT3G59790.1 ATMPK10; MAP kinase/ kinase12976e-143

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  13%
 
181  4%
 
87  30%
 
122  9%
 
201  4%
 
116  26%
 
93  13%

Unigene MembersMember information