 |
Information for unigene UN17581
| FASTA Sequence |
| Unigene ID: UN17581 | Length: 670 |
SSR | | GCCGCAGAACTTTCGTAGGTTTGTTTTATTTGTCTATCTTCTTCATCAACGAGAGAGTTGTGTGTTTTGATCGAAGAAAAGCTTTC
GGTCTTTGTAATCAACAGGGTGTGGAAGAAGTAATGGCAAAAAGCACGTTCAAGCAAGAGCATGACCTAGAGAAGAGAAGCGCAGA
GGCTGCTCGGATTAGAGAGAAGTATCCAGATAGGATTCCGGTGATTGTTGAGAAGGCTGAGAAGAGTGATATACCAACCATCGACA
AGAAAAAATACCTAGTCCCGGCGGATTTGACAGTAGGGCAATTCGTGTATGTGATTCGCAAAAGAATCAAACTGAGCGCAGAGAAG
GCTATCTTTATATTTGTCGACAATGTTCTTCCTCCAACAGGTGCGTTGATGTCTGCAGTGTACGAAGATAAAAAGGAGGAGGATGG
GTTCCTCTATGTCACTTACAGCGGAGAGAACACATTTGGATATGGATCTCCATAGAAGATCTCTCTCTCTCTTACTCGATAATTTC
ATTCTACCTTCTTTCTGTATTTCTCTTCATCTTCTTATTTTAGTTATTTAAGCAAGCAATCAAGCCTATGTACTTCCCTAAGAACG
TTCGATTGGGCGTTGATGTGTACAGAAAACATGAAATAATGTATATAAACTATGCTCTCATAATAATA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868127 hypothetical protein ARALYDRAFT_915092 [Arabidopsis lyrata subsp. lyrata] | 589 | 6e-059 |
| NP_567504 autophagy-related protein 8f [Arabidopsis thaliana] | 584 | 2e-058 |
| XP_002525907 gaba(A) receptor-associated protein, putative [Ricinus communis] | 562 | 8e-056 |
| CAD33929 microtubule associated protein [Cicer arietinum] | 559 | 2e-055 |
| XP_002329916 predicted protein [Populus trichocarpa] | 559 | 2e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VYK7 Autophagy-related protein 8f | 584 | 1e-059 |
| Q8S926 Autophagy-related protein 8e | 519 | 4e-052 |
| A2YS06 Autophagy-related protein 8C | 514 | 1e-051 |
| Q6Z1D5 Autophagy-related protein 8C | 514 | 1e-051 |
| Q9LZZ9 Autophagy-related protein 8g | 514 | 1e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SIT8 Gaba(A) receptor-associated protein, putative | 562 | 5e-056 |
| A9PID1 Predicted protein | 559 | 1e-055 |
| B9GVG5 Predicted protein | 559 | 1e-055 |
| Q8L5F9 Microtubule associated protein | 559 | 1e-055 |
| C6SX89 Putative uncharacterized protein | 556 | 3e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16520.1 ATG8F (autophagy 8f); microtubule binding | 585 | 8e-061 |
| AT4G16520.2 ATG8F (autophagy 8f); microtubule binding | 585 | 8e-061 |
| AT2G45170.1 AtATG8e; microtubule binding | 521 | 2e-053 |
| AT2G45170.2 AtATG8e; microtubule binding | 521 | 2e-053 |
| AT3G60640.1 ATG8G (AUTOPHAGY 8G); microtubule binding | 514 | 1e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
