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Information for unigene UN17602

FASTA Sequence
Unigene ID: UN17602Length: 1049 SSR 
CGTATTTGTTAATGTATTTATTTAGTAGATATGTACCCAAATAAACAGTCGATTAAAAGACCAAATTGAATAGCAAATAAACCAGT
TTGATTTCAATTTTTCTATGACCACACCATAAAACCGGTTCACACACCACTAGATATGTTCAAAATATGGTGACAGATCGTATACA
ACATCAGTTAAACAGTCATTGGATCACATGATGAATCAGAAAATGGCAAATCGATATCCGGTTTAGAGCTTCTTCTTCTGAGCAGC
CTTTATACCGGGAAGTGTTCCAAAGACTCTATCCCAGAGAGATGAAGTGATTCCGTATCCTTTGTCCTGGATTCTGAAGTGATGGT
TCAGATGGTATTTCTTGAGATGCTTGAAGGTTGGTTCTTTAGGTTGACCGTGGTGTAGATAGAAATGAGTACAATCATACATCACA
TAGCCAAACAAAATGCCTCCAAGCATAGCAGGAGCAGTAGCAGGAGTAGCTATGAGGTGCAGAAGCTTCCATAGTGGAACCAAGAG
AATGGCTGTTGCGGTAGGAGGGAAAACATGACGAAGGCCGTCTTGTGGGTGCTTGTGATGGCATCCATGAAGAAGATAGTGTGCAG
TGTTTGCCCAGTAACTCTTGGTTTCTATGTGGAAAAGGAAACGATGAAGTGTGTACTCGAGAAGTGTCCAGGTGAATACGCCAAAT
GCAACTATTAAACCCATCTGAGGAAACGTCAGTCCCCTCGCCGCGGAGATTGAAAGAACGTAGCAGACAACTGGAAGCCAGATTGT
TGGGATTGTCCACCAAACCGTGCGAGTCAGGAACTCCCAAAAATCACTCTGGAAAAAACGAGGACCCTCTACGCATACAATAGGTT
GATGAATCCATTCCTGATATTCCTCCCCAAGATGACCAACCTGAAAGACAAGTGGCTTATCCAAATCGACTGTGAAGCGTTCTGCG
ACCATCTTTGCCACCCACCCAACTGAGACTCCTGGCTTAGAGGAAGAACAAACGCGTCTCTCTCTCTCTCTGGGGGATCGTAAGAG
ACTCGCTTGCTTCTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193819 fatty acid hydroxylase 2 [Arabidopsis thaliana]12451e-134
XP_002867872 hypothetical protein ARALYDRAFT_914595 [Arabidopsis lyrata subsp. lyrata]12432e-134
XP_002300560 predicted protein [Populus trichocarpa]9913e-105
XP_002330558 predicted protein [Populus trichocarpa]9887e-105
XP_002523169 sphingolipid fatty acid alpha hydroxylase [Ricinus communis]9644e-102

Swiss-Prot top hits (Blast detail)Scoree value
Q03529 Ceramide very long chain fatty acid hydroxylase SCS74589e-045
O13846 Ceramide very long chain fatty acid hydroxylase-like protein C19G12.084077e-039
Q2LAM0 Fatty acid 2-hydroxylase3413e-031
Q4R4P4 Fatty acid 2-hydroxylase3396e-031
Q7L5A8 Fatty acid 2-hydroxylase3352e-030

TrEMBL top hits (Blast detail)Scoree value
Q9SUC5 AT4g20870/T13K14_3012458e-135
A9PAI4 Predicted protein9912e-105
B9N5R8 Predicted protein9885e-105
B9SB09 Sphingolipid fatty acid alpha hydroxylase9643e-102
B4F857 Putative uncharacterized protein9572e-101

Arabidopsis top hits (Blast detail)Scoree value
AT4G20870.1 FAH2 (FATTY ACID HYDROXYLASE 2); catalytic/ fatty acid alpha-hydroxylase12454e-137
AT2G34770.1 FAH1 (FATTY ACID HYDROXYLASE 1); catalytic/ fatty acid alpha-hydroxylase9542e-103

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
71  33%

Unigene MembersMember information