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Information for unigene UN17604
| FASTA Sequence |
| Unigene ID: UN17604 | Length: 1346 |
SSR | | GGACCACACCAACCCTCATCGCCTTTTATCCTTCTGTTCTGCTTCAGAGATAGTCACAGTCTCGTCTCTATCGCCTTTTTTTTTAT
TTCACTACACGCCAAAGCTTAAAGACTCTTCTCTCTCTCTCTATGGCTTCCTCTCTCACTGTCGCTGGCACTCAGCCCTCTGCCCC
TTCTTTCTCAGGCCTCCGCCGCACTTGCCCCAAGCTCGACGCCGCCGTCTCCTTCTCCCACCGCGTCAACTCCTCTGTCCGTCTCG
TTTCCTCCTCGCACCGGTCTCCTAGAGGCGTTGTCGCCATGGCCGGGTCCGGAAAGTTTTTCGTCGGAGGAAACTGGAAGTGTAAC
GGGACTAAGGACTCCATCACCAAGCTTGTCTCTGACCTCAACACCGCCACCTTGGAACCAGATGTTGATGTTGTTGTGTCGCCTCC
GTTTGTGTACATCGACCAAGTCAAATCATCCTTGACAGACCGTATTGAAATATCTGGTCAGAACTCTTGGGTTGGGAAAGGTGGAG
CTTTCACTGGTGAAATCAGCGTGGAACAGCTCAAAGACATTGGCTGCAAGTGGGTCATTCTTGGCCATTCCGAAAGGAGGCATGTC
ATCGGAGAAAAGGATGAGTTTATTGGGAAGAAAGCTGCTTACGCGTTGAGCGAGGGTCTTGGAGTGATAGCTTGTATCGTGGAGAA
GCTAGAAGAGAGGGAAGCTGGCAAGACTTTTGATGTTTGCTTCGACCAATTAAAGGCCTTCGCTGATGCGGTGCCTAGCTGGGACA
AGGTAGTGGTTGCATACGAGCCAGTATGGGCGATTGGAACTGGCAAAGTTGCATCTCCCCAGCAAGCACAGGAAGTCCATGTAGCT
GTCCGTGACTGGCTCAAGAAGAATGTCTCTGAAGAGGTTGCTTCCAAAACAAGGATCATATACGGAGGTTCTGTCAATGGAGGCAA
CTGTGCTGAGCTTGCCAAAGAAGAAGACATTGATGGTTTTCTTGTCGGCGGTGCCCCCTTGAAGGGACCTGAGTTTGCGACCATTG
TGAACTCAGTCACGTCAAAGAAAGTTGCTGCTTGATTGACAACTTTCCGCACGTCTCCATGGAACGAATGAGAGGATGAAATAAAA
GGGAGGTTGGCGAGCTTGTTGTTGTTGTGTTCTTAGTTGTTCTTGAACTAATAATGAAAAAAACAAAAATTGATTCATGAGTTCTG
GTTTGAAGGAAGTTTAGTTTCCGGCGAGAAAAAGGGTCTTTGGTTTAAGATCTTTCTTGTCTCTTATAAAGTGATTACACTATTTA
CTTGTGAATTCAAGAGTCCTTTTTCTATATAATCTTTAAAAATAATTCTCAAGACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880361 hypothetical protein ARALYDRAFT_900526 [Arabidopsis lyrata subsp. lyrata] | 1403 | 8e-153 |
| NP_179713 triosephosphate isomerase [Arabidopsis thaliana] | 1355 | 3e-147 |
| NP_001077931 triosephosphate isomerase [Arabidopsis thaliana] | 1329 | 3e-144 |
| P48496 RecName: Full=Triosephosphate isomerase, chloroplastic; Short=TIM; Short=Triose-phosphate isomerase; Flags: Precursor | 1321 | 3e-143 |
| XP_002529248 triosephosphate isomerase, putative [Ricinus communis] | 1310 | 5e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SKP6 Triosephosphate isomerase, chloroplastic | 1355 | 1e-148 |
| P48496 Triosephosphate isomerase, chloroplastic | 1321 | 1e-144 |
| Q9M4S8 Triosephosphate isomerase, chloroplastic | 1297 | 7e-142 |
| P46225 Triosephosphate isomerase, chloroplastic | 1144 | 4e-124 |
| P12863 Triosephosphate isomerase, cytosolic | 812 | 1e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MRE8 Triosephosphate isomerase | 1329 | 2e-144 |
| B9STC9 Triosephosphate isomerase | 1310 | 3e-142 |
| D6N3G7 Triosephosphate isomerase | 1289 | 9e-140 |
| C6TK22 Triosephosphate isomerase | 1270 | 1e-137 |
| C6T7V6 Triosephosphate isomerase | 1263 | 9e-137 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G21170.1 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 1410 | 4e-156 |
| AT2G21170.2 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 1331 | 7e-147 |
| AT3G55440.1 TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase | 794 | 1e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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