 |
Information for unigene UN17623
| FASTA Sequence |
| Unigene ID: UN17623 | Length: 902 |
| SNP | AGATAGAAAAATAGAAATTTCATTCTCTCAACAATCAGAATACAACGCATTAGCCTTGCCTGAGAGGCAAATGATCAAATAAAAAC
AAAGACGAATGGATTGAAATAACAAAGAAGCAAAAGCGCTCCTAAAATCAAAATGACAGTAAGAATCAAAAGAGATTTTTTTTTAT
TCTTCTTCACACACTGCAAGCTCTTTCTCTCTTCAAGCTCTTTATAATGGTTCCGCATCTCCTTCATTCCTCCTCGGCAAGAGGAA
CAGCCTTAGCCAGTGGGCGATACTTCAATGCATAGAACATCTCAAGGTAACGACGGCTCTCAAGACGGTCAAGGTTCGATACATGC
TTCCAGAATCCATACACACCAGTCAATGTCAGAAGCCTCTGTGAGTATATCTGCCACGTGTATTTCTCCTCAATCCTCTGAAGCCC
TCCCTTTGAGATCTCATCCCAGTGAGATGGATCTTCTTTACACTTAGTGAAGAAGTCAGCAAGAGTATCAGCAGCCTGATCACCAT
GGTAAGGGTCAATATGGAAGCCAGATTTGCCGTGCACAATGATCTCAGCTGGACCACCTTTGCAAGTGGCGAAAGTCGGCAAACCA
CAGGTCATGGCCTCCACAACAGTCAGACCAAAGGCTTCATACAACGCAGGCTGCACGAAGGCGCCCTTGGTGTCACAGATGTAACG
GTAGAGCTCACCGTTCCTAACCCTGTTCATCTGTGAAGAGATCCACCTGAACTGACCGTTGAGGTTTTGGATTTTCTCGTTCAGCA
TCAGAGTCTTTCCCTGGTGGCTGTGTAGTTGAAGGAACTTAAGCAAAGGAAGCAAACTGTCCTTTTCATGGAAGAGCTTAGCTGAG
AGGTGACGGTTAAGGAACTCAACACCATCTCCAATGTACTTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_197583 sucrose synthase 1 [Arabidopsis thaliana] | 905 | 2e-095 |
| BAD94975 sucrose-UDP glucosyltransferase [Arabidopsis thaliana] | 905 | 2e-095 |
| 3S28 Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose | 905 | 2e-095 |
| XP_002874016 hypothetical protein ARALYDRAFT_910122 [Arabidopsis lyrata subsp. lyrata] | 900 | 9e-095 |
| 3S27 Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. | 887 | 3e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49040 Sucrose synthase 1 | 905 | 1e-096 |
| P13708 Sucrose synthase | 834 | 2e-088 |
| Q01390 Sucrose synthase | 813 | 5e-086 |
| P31926 Sucrose synthase | 812 | 6e-086 |
| P10691 Sucrose synthase | 804 | 5e-085 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q56WF2 Sucrose-UDP glucosyltransferase | 905 | 2e-095 |
| Q94CC8 Putative sucrose synthase | 879 | 2e-092 |
| Q9LXL5 Sucrose synthase-like protein | 879 | 2e-092 |
| C8YQV0 Sucrose synthase 1 | 853 | 2e-089 |
| Q9XGB7 Sucrose synthase | 841 | 4e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G20830.1 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase | 906 | 7e-098 |
| AT5G20830.2 SUS1 (SUCROSE SYNTHASE 1); UDP-glycosyltransferase/ sucrose synthase | 906 | 7e-098 |
| AT3G43190.1 SUS4; UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 880 | 8e-095 |
| AT4G02280.1 SUS3 (sucrose synthase 3); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 708 | 7e-075 |
| AT5G49190.1 SUS2 (SUCROSE SYNTHASE 2); UDP-glycosyltransferase/ sucrose synthase/ transferase, transferring glycosyl groups | 688 | 1e-072 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
