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Information for unigene UN17630

FASTA Sequence
Unigene ID: UN17630Length: 1196  SNP
CATCTCCACTTTGAAAAATGTTATAAGAACTCATCAAATACAAGTTGTGATACATGTTTTATTTAATCCATCAGGTTGACATTACA
TATTTATTTGGGAAACCAAGAGATAAGCTTGGTTTTTTCACTTGCAACTACCAAGAGGTGCACCACACAAACACTTATTGTGAAAA
TACGTATAAGAATCAAATCTCTGAAGACTTCCTCCAGTGGGGATGCGTCCACACAGTCTGTTATAGCTAACGTTTAAGAGTTGGAG
AGAATTTTCAGTCCACTGAACCGGAATACTCCCAGTGATCTTATTGTGGTTCAAGTCCAAGACAGCAAATGACTCATGGAGCTCAA
CTCTGGACAGATCGAACTGGAACATGTTTCTTGATAAGTCAATGGAAAACGTCGTTTTTTTTGCTCCAAACAACATCGAAGCATCG
CCTGTGAGCTTGTTCCTTGAGAAATCTATGTGGTTAAAATCAATGTTGCCTAGTGATTTGGGTATAGAACCGGAGAGCTGGTTGTG
TGATAAGAGAAGGTAAGGAGGTTCTGCTAGAAACGATCCAAATGACTCTGGTATTGTACCTGTAATCTTATTCCTACTAAGATCAA
CGTACGAAAGTTTAGGTAACGAGGAGAGAGAGCTAGGTAAGGAACCAGAGAGCTGATTGAAGGAAAGGTCTAGGTTGTCGAGGTTC
ATGAGCTGACTCAGAAACTCAGGAACCGGGCCGGTGAGGTTGAGCCAGCTAAGCCTGAGAGAACGGAGATACTTAAGCTTGGTGAT
GGTGGATGGGATCTGACCGGTGATGTTAGTGATCTTGTGGAACATAAGATTCTGAAGATACGGTAAGTCACCGACTTCAGGCGGGA
TCTGACCAGATATCTGACCGGAGAATATGGTTAGGGAGATGACGCGGTGGTTAACGGTAGCGTCGCCGCACTCGAGGCTGTACCAG
GAGCAGCAGTCGCTTTTGGGATCCCACGAGGCGAGGTGGTAAGGGTTGTTTAGGGACTTCTTGATCTTGAGGAGGGTGTTTTTGTC
GTTTTTGTTACATAGATCTTTCGTTGAAGCGATGGTGATGAGGTACGTGATGAAAAACAAGAAATAGAAAAGCAGTGTCGTGTTTG
TCTTATGATCCATGTTGTATGGGGTTTTGTTTTCCATTTTTTTGTTGAAAGTGTAACGATGATATATATACACTACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABX46555 polygalacturonase inhibitor protein 9 [Brassica napus]15694e-172
ACP28179 polygalacturonase-inhibiting protein 4 [Brassica rapa subsp. pekinensis]14386e-157
ABX46558 polygalacturonase inhibitor protein 12 [Brassica napus]14314e-156
ABX46562 polygalacturonase inhibitor protein 16 [Brassica napus]14118e-154
ABX46551 polygalacturonase inhibitor protein 5 [Brassica napus]13203e-143

Swiss-Prot top hits (Blast detail)Scoree value
Q9M5J9 Polygalacturonase inhibitor 112904e-141
Q9M5J8 Polygalacturonase inhibitor 212529e-137
Q05091 Polygalacturonase inhibitor10118e-109
A7PW81 Polygalacturonase inhibitor10002e-107
P35334 Polygalacturonase inhibitor 16855e-071

TrEMBL top hits (Blast detail)Scoree value
A9YBZ0 Polygalacturonase inhibitor protein 915693e-172
C3VX45 Polygalacturonase-inhibiting protein 515693e-172
C3VX47 Polygalacturonase-inhibiting protein 414384e-157
A9YBZ3 Polygalacturonase inhibitor protein 1214313e-156
A9YBZ7 Polygalacturonase inhibitor protein 1614115e-154

Arabidopsis top hits (Blast detail)Scoree value
AT5G06860.1 PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding12912e-142
AT5G06870.1 PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding12536e-138
AT3G12145.1 FLR1; enzyme inhibitor/ transcription factor binding8163e-087
AT5G48940.1 leucine-rich repeat transmembrane protein kinase, putative3226e-030
AT2G26380.1 disease resistance protein-related / LRR protein-related3101e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
86  17%
 
123  9%
 
613  37%
 
912  34%
 
101  3%

Unigene MembersMember information