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Information for unigene UN17657

FASTA Sequence
Unigene ID: UN17657Length: 1872  SNP
ATTTAACAAATCAGTGATGTTTTTATTGATGCATTTGTAGTTCTACCAGTGCACTAAAGTTCCAGTTTCTTGTCCGAAAACAAACA
CTCTTCTATAAATCAAAACAATCTGTCTGAACAATCTTTACAAGTAACAACCATTTTTTTTGTCGAACAAAGAGTAAAAGACCTTA
CGTTTTCAAACATCCACCACCACATATCCCATGCATGATTAAACGATATGTACACTTCTTGAAACACCCTTCCGTGTTTCTTGATC
GGATCCATTGATACTCCCTTTTCTTCTGAACGATCTTTGACTCTTACTGAACATCCTAGAAAATATCTTAGCAGGAGCAGGCGCTT
CTGTTATAGACCCTTCCTCCTTTACCGAACCGCCATCCTTCAGGTCCAAGTCCTCTGATAGTTTCTTCACTAAACACACAAAATGT
CTACGGAAGGTTGGATACCTTGATACTGTTTTCGTTAGCCCATTAATCCTGCGAGCAAAGGCGTCAAGCTCAGCTCTTTTACGCTC
TGTGAGAGTAGGAAAAGCAGAATCAGCATACGAGTTCTTGAGCCTCTCTGAGTCTCCATAAAGCAACACCAATCTCCCGAGATACT
CTTCTTCTTCCTCAGACAAGTTTGTAGCTTTCATCTGCTCCTTTAGTATCAAAAACGGATGCAGAAACCAATCAAAGAAAGCATCC
TTTGGTCGGTTCTTGGTAGTTAGTTCTGTTACACCGTCACTGAGTAACAAGCCGGTAGTATTGGCTTTGACAGAGCGTAGAATCTC
GTAAAGAAGTGCATAAGCTGGTAAGCCAACGCTGATCACTTGGCTGCCTTTACTAGACCTGGCCTCTTCGATATCTTTGGAGTTTA
TTAGCCCTTTACTCGCCAAAGCTTCACCAAACTTCCTACATTCCACAAATAGATCATCCAAGAGGTCGAGAGGCTTAATATCAATC
ATAGGGACTTTAACTGATCCATCTCTTGTTGAAGCTGTGTTCTTGAGAGAGCCTAATATTGGTATAGGACCCGAAAAAGCCGTTGA
TTCGGTTTCTTTTTCTCGATACTTAGGCCTTGGGAAGCAAGATCCTTCAGGCATGTCAAGTATATCTGTGCTATACTCGTCGTAGA
TGGACAAAGAGGCAACCACAAAGCATAGTCCATAGTAAAAAGATGATTCCTGATACGAGACTACTCCTGCATAAGCACCGAGGAAG
ATACTAGAGACCACTGAACCAAGAACCGCGCCCACGACAGCCAAGGGCCAGAGCAAGATCACTAGCTCCGCGATGGGGACACACAT
CGTCTCCAAGAAAGGACCTTCACGTCCGATGAGATCGTGAAACAAACGGTGCCATCCTTTGAAGAGCATGTAAGGGCTTTTGCATA
TGGCTACGAGTGTGATCACTGGTAGATCAACAAGAATCCCGAGAGCCGAAACTATCAGAGCCCCTGGAAGTTGAAGCAGCCTTATC
TCATAATGTTTCTGATCAGGGCAACATGTTCTAAGCTCATCCATTAGGGAGAAGTAGGAGTGGAAGCACACGTCTTTAAAGTCGCG
GACGACGGTGAAGCTCCGCTTGAGGCTGCTCCAAGTTCCATCGTAAAAGCAATGGAAAAACGGGTAAGGCTTGCCCTCTCCAACGG
CGTCAAAGGTGGCGAAAATCGGGGAGAGGAAACCGTATAAAGCTCCTCCAAGAAGACTTGCTAAAATACCAAGAACTAGCCAGAGA
ATGATGGCGGCAGGGAAACATAAGCATAGAAAGAACTTCAAGATCTGTCCTATTTGTTTGGCTCTCACTATTGAATAGAAAGTCCA
AACGATGTGGACGGGTAAAAGACTTAGTATGACCGCAGAATTGCCAATTGTCACAACGAGGCATAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877048 hypothetical protein ARALYDRAFT_484528 [Arabidopsis lyrata subsp. lyrata]24353e-272
NP_189375 uncharacterized protein [Arabidopsis thaliana]24282e-271
AAO00744 Unknown protein [Arabidopsis thaliana]24245e-271
NP_198880 uncharacterized protein [Arabidopsis thaliana]20705e-230
XP_002870689 hypothetical protein ARALYDRAFT_493918 [Arabidopsis lyrata subsp. lyrata]20519e-228

Swiss-Prot top hits (Blast detail)Scoree value
Q8GUM4 Uncharacterized membrane protein At3g2739024313e-273

TrEMBL top hits (Blast detail)Scoree value
Q84K38 Putative uncharacterized protein At5g4064020704e-230
B9GIX9 Predicted protein18033e-199
B9SLS8 Putative uncharacterized protein16781e-184
C5YAV9 Putative uncharacterized protein Sb06g02056014396e-157
B8AVJ1 Putative uncharacterized protein14021e-152

Arabidopsis top hits (Blast detail)Scoree value
AT3G27390.1 unknown protein24367e-275
AT5G40640.1 unknown protein20773e-233
AT4G12680.1 unknown protein11006e-120
AT4G37030.1 unknown protein6552e-068

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  27%
 
102  18%
 
72  18%
 
82  18%
 
212  18%

Unigene MembersMember information