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Information for unigene UN17658
| FASTA Sequence |
| Unigene ID: UN17658 | Length: 950 |
SSR | | GGATATAGGTTTTAAAGCAGCTCAGCTCCGTCAATTACCTCCTCCTCCTCCTCCTAATCTCTTCCACTCCCTCCTAACAGCAGCAA
TCAAATGGCGCTTACCTTCTCAGATCTACACACAGAGCAGGGTGTCAAATCCGTGGAGGAGCACCTCGCCGGAAAAACCTACATCT
CCGGAGATCAGTTGTCTGTGGATGATGTGAAGGTATACGCTGCCGTTTCGGGGAAACCCAGCGATGCTTTCCCCAATGCTAGCAGG
TGGTACGATTGCGTCGCTTCCCACCTTGCTAAAAGTTTCCCTGGAAAAGCCGTTGGAGTGAGTATTGGTGGCTCTGCTGTTGCTGC
TCCTGCTCAAGCTGAGGCACCTGCATCAGCTGTAGCTGAGGATGATGATGATGACATGGATCTGTTCGGTGATGAGACCGAGGAGG
AAAAGAAAGCTGCAGAGGAGAGGGAGGCTGCTAAGAAGGACACCAAGAAGCCTAAAGAGAGTGGAAAGTCCTCTGTGCTCATGGAA
GTGAAACCATGGGATGACGAGACAGATATGAAGAAACTTGAGGAGTGTGTTCGTGCTGTTGAGATGCCTGGTCTTCTATGGGGAGC
TTCAAAACTGGTTCCAGTTGGTTACGGTATCAAGAAGCTCACGATCATGCTCACAATTGTTGATGACCTCGTGTCCCCTGACAACC
TCATTGAAGACTATCTCACCAGTGAACCTAACAACGAGTACATCCAGAGTGTTGACATCGTTGCATTCAACAAGATCTAAGAGACT
TTAAAACCTCTCCCTACCCCCACAAACAATACATTTGATTTCCTTCCAAGTTTTGTTCTTTTCTGCTGTTTGCTTGTTTTCTAGTT
GCAAGACCTAGTTCATGTTACTAGAAACATAAACTATCAATACTTTTTTTTATTTCTTTACATTATCTTAAGATACACTCAAGTAC
CGCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 1030 | 8e-110 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 1011 | 1e-107 |
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 954 | 5e-101 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 941 | 2e-099 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 868 | 5e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX3 Elongation factor 1-beta 2 | 1016 | 2e-109 |
| Q84WM9 Elongation factor 1-beta 1 | 941 | 8e-101 |
| P29545 Elongation factor 1-beta | 820 | 8e-087 |
| P29546 Elongation factor 1-beta | 745 | 4e-078 |
| P93447 Elongation factor 1-delta | 714 | 2e-074 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 941 | 1e-099 |
| A9P7W8 Predicted protein | 840 | 6e-088 |
| B9GEM9 Predicted protein | 824 | 4e-086 |
| B3TLP3 Translation elongation factor EF-1 beta chain | 787 | 9e-082 |
| B6SIK8 Elongation factor 1-beta | 781 | 4e-081 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 1017 | 1e-110 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 942 | 5e-102 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 655 | 1e-068 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 654 | 1e-068 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 653 | 2e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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