Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN17665

FASTA Sequence
Unigene ID: UN17665Length: 975 SSRSNP
GGGAATCAAAGTCGTTGCAAAGCAAGTAGTGTGAAGGCTATCTCTTATTACAACACCACCGAGCCTGCGTAAACACTTAAGAAGAA
AAGTCTCCAATGGAATCGAAGCAAATGTAAACACTTGGGAAGAATTTAAAGATACAACCCCAAAGTTTAAATACTTGTCCAATGAG
TTCTGATATGTCTGCTTTTAGGACTACAAATGACAAATTCTTGTTTAACGGAAATGAGAGAAAATGGGCACTCGGAAACAATGATT
AGTTAACTGTTGATTCATGTTTATTCTTTTCTCGAATCACAGTATGGAACAGCCTTTCTGAGCTGTACTAATGTTGTTGTTGTAGT
TATTGGGTGGCTTGAGAACTACTTTGATGGCCTCATCAAAGACAGCTTTAACGTTCAATTGTGTCTTTGAACTGCATTCTATATAA
GCAGAAGCTCCAACCAGCCTCTTTAGTTCTTCACCCTGAGCAGTAGATATAGGCACAGCTCCAGGGTGCTCAAGAAAGTACTGCTT
ATCATCTCGAGCATCGAGCTTTGTTCCAACAAGTAAGATGGGAACATTAGGAGAATGATGCCTGAGTTCAGGAACCCACTTCTTAG
CAACATTTTCATAGCTAGCTTTGTCAACAAGAGAGAATGCGAGCAAGAAGACATCAGTACATGGATAGCTTAATGGTCTTAGTCTA
TTGTAGTCATCTTGTCCTGCAGTGTCCGCCAATTCCAAGTTGATGGTGCTCCCATCGACAATCACATGGACGCTGACATTTTCAAA
AACAGTTGGCATATCATCGGTGGTGAAAGTGTTTCTAGTGTAGGAAATGAGTAGACAAGTCTTGCCGACGGCGCCGTCACCGACGA
TGACACACTTTAACCTTGGAGTACTCATGTTCTCGCCGTTGACTTTAAATCCTCCTTTTGATTTGGGCAGAGAGAGAGAGAGATGG
ATGCTCTTTAGGTAGCACCCCCGGCCGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195228 Rac-like GTP-binding protein ARAC3 [Arabidopsis thaliana]7772e-080
AAB97458 rac-like small GTP binding protein [Brassica rapa subsp. campestris]7762e-080
AAO42256 putative Rho1Ps homolog Rac protein [Arabidopsis thaliana]7744e-080
AAB38780 Rho1Ps homolog [Arabidopsis thaliana]7701e-079
XP_002278633 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]7655e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q38912 Rac-like GTP-binding protein ARAC37778e-082
Q6EP31 Rac-like GTP-binding protein 57562e-079
Q39435 Rac-like GTP-binding protein RHO17421e-077
Q38902 Rac-like GTP-binding protein ARAC17374e-077
O04369 Rac-like GTP-binding protein RAC17374e-077

TrEMBL top hits (Blast detail)Scoree value
Q5PNX9 At4g350207771e-080
O49180 Rac-like small GTP binding protein7762e-080
A5AP72 Putative uncharacterized protein7653e-079
B9H198 Predicted protein7573e-078
B7EDK5 Putative uncharacterized protein7564e-078

Arabidopsis top hits (Blast detail)Scoree value
AT4G35020.1 ARAC3 (ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase7786e-083
AT2G17800.1 ARAC1; GTP binding7411e-078
AT2G17800.2 ARAC1; GTP binding7411e-078
AT3G51300.1 ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding7347e-078
AT4G35950.1 ARAC6 (ARABIDOPSIS RAC-LIKE 6); GTP binding7302e-077

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  22%
 
93  33%
 
62  22%
 
121  11%
 
81  11%

Unigene MembersMember information